Best Alignments for T0473

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2fi0A	8.5491e-02	2fi0A/T0473-2fi0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.248.1.1
1w9iA	1.3592e+01	1w9iA/T0473-1w9iA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1y6uA	1.7883e+01	1y6uA/T0473-1y6uA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1u3eM	1.8549e+01	1u3eM/T0473-1u3eM-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.4.1.3 d.285.1.1
2v26A	2.7758e+01	2v26A/T0473-2v26A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1w7jA	3.2511e+01	1w7jA/T0473-1w7jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.3.1 c.37.1.9
2bkhA	4.4461e+01	2bkhA/T0473-2bkhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qw1A	4.5326e+01	1qw1A/T0473-1qw1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1m85A	4.6139e+01	1m85A/T0473-1m85A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	e.5.1.1
2gwfB	4.8417e+01	2gwfB/T0473-2gwfB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1fe0A	5.3193e+01	1fe0A/T0473-1fe0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.58.17.1
1ae7A	6.0344e+01	1ae7A/T0473-1ae7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.133.1.2
1jpyA	6.1490e+01	1jpyA/T0473-1jpyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.17.1.6
1dgfA	6.6112e+01	1dgfA/T0473-1dgfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	e.5.1.1
1xb4A	6.7025e+01	1xb4A/T0473-1xb4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.54 a.4.5.54
1gbs	6.8950e+01	1gbs/T0473-1gbs-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2j01U	6.9023e+01	2j01U/T0473-2j01U-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2feaA	6.9153e+01	2feaA/T0473-2feaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.108.1.20
2oap1	7.7518e+01	2oap1/T0473-2oap1-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2al3A	7.7604e+01	2al3A/T0473-2al3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.15.1.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001