# List of top-scoring protein chains for t06-w0.5-1-o_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2fi0A	81	0.8608	a.248.1.1	133507
1w9iA	770	15.45		
1y6uA	70	23.74		
1gbs	185	29.15		
1u3eM	174	31.25	d.4.1.3,d.285.1.1	107640,107641
1gbsA	185	31.64	d.2.1.5	36986
2v26A	784	33.80		
2oy9A	98	40.67		
2oap1	511	41.95		
1jpyA	137	42.22	g.17.1.6	67065
1xb4A	202	49.68	a.4.5.54,a.4.5.54	121832,121833
2feaA	236	50.91	c.108.1.20	133327
1w7jA	795	51.81	b.34.3.1,c.37.1.9	120688,120689
1m85A	484	52.54	e.5.1.1	74578
1qw1A	121	53.23		
1dgfA	497	60.36	e.5.1.1	42782
1ae7A	119	63.77	a.133.1.2	19553
2v9cA	215	64.59		
2bkhA	814	64.70		
1fe0A	68	65.62	d.58.17.1	39345
1aorA	605	69.18	a.110.1.1,d.152.1.1	19042,41794
2pnkA	428	69.24		
1pq7A	224	75.41	b.47.1.2	95002
1ik9A	213	75.50	b.59.1.1,h.1.11.1	66176,66177
1vehA	92	79.17	d.52.8.1	113635
1sur	215	80.32		
2z99A	219	81.96		
2d2mC	147	82.60		
1jf4A	147	84.63	a.1.1.2	71643
2zmfA	189	84.94		
2gwfB	134	85.94		
2f6mA	65	86.30	a.2.17.1	133051
2qeeA	437	88.90