# List of top-scoring protein chains for t04-w0.5-1-CB_burial_14_7-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2fi0A	81	0.4231	a.248.1.1	133507
1w7jA	795	22.36	b.34.3.1,c.37.1.9	120688,120689
1y75B	118	25.43		
1mvwA	840	33.72	i.15.1.1	79523
2akaA	776	35.54		
2dlxA	153	36.20		
1r9lA	309	43.54	c.94.1.1	97262
2qebA	145	45.03		
3c8yA	574	48.64		
1aorA	605	57.22	a.110.1.1,d.152.1.1	19042,41794
1yzbA	182	57.40		
2d2mA	140	59.99		
2pytA	133	60.73		
1y6uA	70	64.14		
1a4mA	349	68.92	c.1.9.1	29014
1vflA	356	70.45	c.1.9.1	120041
2aa1A	144	72.00	a.1.1.2	126463
2gwfB	134	75.08		
2fzpA	144	76.45		
2bkhA	814	79.23		
1aocA	175	84.71	g.17.1.5	44817
1ae7A	119	88.27	a.133.1.2	19553