Best Alignments for T0472

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
3bidA	3.0122e-09	3bidA/T0472-3bidA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2rp4A	2.9687e+01	2rp4A/T0472-2rp4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1tqzA	3.9762e+01	1tqzA/T0472-1tqzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.55.1.11
2f20A	4.7689e+01	2f20A/T0472-2f20A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.303.1.1
1t4nA	4.9203e+01	1t4nA/T0472-1t4nA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.50.1.1
2fa1A	5.7385e+01	2fa1A/T0472-2fa1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.190.1.2
2dfzA	6.2484e+01	2dfzA/T0472-2dfzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2i79A	6.9788e+01	2i79A/T0472-2i79A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1t92A	7.4588e+01	1t92A/T0472-1t92A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.24.1.3
1wfbA	7.4730e+01	1wfbA/T0472-1wfbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pz4A	8.0252e+01	2pz4A/T0472-2pz4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2b9kA	8.1343e+01	2b9kA/T0472-2b9kA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2rghA	8.2831e+01	2rghA/T0472-2rghA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ghaA	8.7498e+01	2ghaA/T0472-2ghaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2yhx	8.9892e+01	2yhx/T0472-2yhx-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1w4sA	9.3328e+01	1w4sA/T0472-1w4sA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1hzfA	9.5261e+01	1hzfA/T0472-1hzfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1wxcB	9.5515e+01	1wxcB/T0472-1wxcB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ursA	9.5788e+01	1ursA/T0472-1ursA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.94.1.1
1q8bA	9.5957e+01	1q8bA/T0472-1q8bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.58.4.6

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001