Best Alignments for T0472

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
3bidA	6.1931e-09	3bidA/T0472-3bidA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2rp4A	2.9395e+01	2rp4A/T0472-2rp4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2f20A	4.9733e+01	2f20A/T0472-2f20A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.303.1.1
1z4rA	5.2647e+01	1z4rA/T0472-1z4rA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1wr3A	5.7057e+01	1wr3A/T0472-1wr3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1wfbA	5.8523e+01	1wfbA/T0472-1wfbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1j0wA	5.8910e+01	1j0wA/T0472-1j0wA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1yreA	6.1105e+01	1yreA/T0472-1yreA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1bo4A	6.1186e+01	1bo4A/T0472-1bo4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2prbA	6.2449e+01	2prbA/T0472-2prbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1x7vA	6.2694e+01	1x7vA/T0472-1x7vA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.58.4.11
1zn6A	6.3030e+01	1zn6A/T0472-1zn6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.303.1.1
1vkcA	6.3600e+01	1vkcA/T0472-1vkcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2atrA	6.3706e+01	2atrA/T0472-2atrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1yvoA	6.4469e+01	1yvoA/T0472-1yvoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1tiqA	6.6584e+01	1tiqA/T0472-1tiqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1y9kA	6.8241e+01	1y9kA/T0472-1y9kA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
1on0A	6.8772e+01	1on0A/T0472-1on0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1yghA	6.8970e+01	1yghA/T0472-1yghA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ob0A	6.9088e+01	2ob0A/T0472-2ob0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001