(c) 1992-2000 Regents of the University of California, Santa Cruz
Sequence Alignment and Modeling Software System
http://www.cse.ucsc.edu/research/compbio/sam.html

Citations (SAM, SAM-T99, HMMs)

Sequence numbers correspond to the following labels:

    • T0472 SoR190, Shewanella oneidensis MR-1, 110 residues
    • gi|163311089|pdb|3BID|A_3:47 Chain A, Crystal Structure Of The Nmb1088 Protein From Neisseria Meningitidis. Northeast Structural Genomics Consortium Target Mr91 [Taxonomy]
    • gi|163311090|pdb|3BID|B Chain B, Crystal Structure Of The Nmb1088 Protein From Neisseria Meningitidis. Northeast Structural Genomics Consortium Target Mr91 [Taxonomy]
    • gi|163311091|pdb|3BID|C Chain C, Crystal Structure Of The Nmb1088 Protein From Neisseria Meningitidis. Northeast Structural Genomics Consortium Target Mr91 [Taxonomy]
    • gi|163311092|pdb|3BID|D Chain D, Crystal Structure Of The Nmb1088 Protein From Neisseria Meningitidis. Northeast Structural Genomics Consortium Target Mr91 [Taxonomy]
    • gi|163311093|pdb|3BID|E Chain E, Crystal Structure Of The Nmb1088 Protein From Neisseria Meningitidis. Northeast Structural Genomics Consortium Target Mr91 [Taxonomy]
    • gi|163311094|pdb|3BID|F Chain F, Crystal Structure Of The Nmb1088 Protein From Neisseria Meningitidis. Northeast Structural Genomics Consortium Target Mr91 [Taxonomy]
    • gi|163311095|pdb|3BID|G Chain G, Crystal Structure Of The Nmb1088 Protein From Neisseria Meningitidis. Northeast Structural Genomics Consortium Target Mr91 [Taxonomy]
    • gi|163311096|pdb|3BID|H Chain H, Crystal Structure Of The Nmb1088 Protein From Neisseria Meningitidis. Northeast Structural Genomics Consortium Target Mr91 [Taxonomy]
              10         20        30         40        50             
              |          |         |          |         |             
   1 MSGWYELSKS.SNDQFKFVLKAGNGEVILTS.ELYTGKSGAMNGIESVQTNSP.....IE.....
   2 MSGWYEISQA.KDGQYRFVLKAGNGEIILTS.ELYKAKASAENGIASVQKNSS.....DD.....
   3 MSGWYEISQA.KDGQYRFVLKAGNGEIILTS.ELYKAKASAENGIASVQKNSS.....DD.....
   4 MAGWYEITQA.NDGQYRFVLKAGNGEIILNS.ELYKAKASAVNGIESVQKNSS.....DD.....
   5 MAGWYEITQA.NDGQYRFVLKAGNGEIILNS.ELYKAKASAVNGIESVQKNSS.....DD.....
   6 MAGWYEITQA.NDGQYRFVLKAGNGEIILNS.ELYKAKASAVNGIESVQKNSS.....DD.....
   7 MSGWYELSKS.SNDQFKFVLKAGNGEVILTS.ELYTGKSGAMNGIESVQTNSP.....IE.....
   8 MSGWYELKKS.SNGQFRFVLKAANAEVILSS.EQYTTRAAAENGIASVQANSP.....LE.....
   9 MSGWYELSKS.SNEQFKFVLKAGNGEVILTS.ELYTGKSGALNGIESVQTNSP.....IE.....
  10 MAGWFELSKS.SDNQFRFVLKAGNGETILTS.ELYTSKASAEKGIASVRSNSP.....QE.....
  11 MAGWFELSKS.SDNQFRFVLKAGNGETILTS.ELYTSKASAEKGIASVRSNSP.....QE.....
  12 MAGWFELSKS.SDSQFRFVLKAGNGETILTS.ELYTSKASAEKGIASVRSNSP.....QE.....
  13 MAGWFELSKS.SDNQFRFVLKAGNGETILTS.ELYTSKASAEKGIASVRSNSP.....QE.....
  14 MAGWFELSKS.SDNQFRFVLKAGNGETILTS.ELYTSKASAEKGIASVRSNSP.....QE.....
  15 MAGWFELSKS.SDSQFRFVLKAGNGETILTS.ELYTSKASAEKGIASVRSNSP.....QE.....
  16 MAGWFELSKS.SDNQFRFVLKAGNGETILTS.ELYTSKASAEKGIASVRSNSP.....QE.....
  17 MAGWFELSKS.SDNQFRFVLKAGNGETILTS.ELYTSKTSAEKGIASVRSNSP.....QE.....
  18 -MGHYEIKKA.KNGQYHFNLKASNGEIILSS.EMYASKASAENGIASVQSNSP.....LE.....
  19 MAGWFELGKS.SDNQFRFVLKAGNGEIILTS.ELYTSKASAEKGIASVRSNSS.....QD.....
  20 -MGHYEIKKA.KNGQYYFNLKASNGEIILSS.EMYASKASAENGITSVQSNSP.....HE.....
  21 MAGWFELSES.SDNQFRFVLKAGNGETILTS.ELYTSKASAEKGIASVRSNSP.....QE.....
  22 -MGHYEIKKA.KNGQYHFNLKASNGEIILSS.EMYASKASAENGISSVQSNSP.....LE.....
  23 MAGWFELSKS.SDNQFRFVLKAGNGETILTS.ELYTSKASAEKGIASVRSNSP.....QE.....
  24 --GHYEIKKA.KNGQYHFNLKASNGEIILTS.EMYASKASAENGISSVQSNSP.....LE.....
  25 MAAKFELMKA.TNGQYYFHLKSGNGEIILAS.ERYEEKSGAKNGIASVRENAP.....LD.....
  26 MAAKFELMKA.TNGQYYFHLKSGNGEIILAS.ERYEEKSGARNGIASVRENAP.....LD.....
  27 MAAKFEIYKD.KAGEFRFRLKATNGQTILAS.EGYKARAGCMNGVESVRKNAP.....DD.....
  28 -LGHYEIKKA.KNGQYHFNLKASNGEIILSS.EMYASKASAENGIASVQSNSP.....QE.....
  29 -LGHYEIKKA.KNGQYHFNLKASNGEIILSS.EMYASKASAENGIASVQSNSP.....QE.....
  30 MAGHFELSKS.SDGQFRFVLKAGNGEIILTS.ELYKTRAAAENGIASVQTNSP.....LA.....
  31 MAAKFELKKA.VNGQYYFHLKSANGEIILAS.ERYEEKSGARNGIASVRENAP.....LD.....
  32 --GHYEIKKA.KNGQYHFNLKASNGEIILSS.EMYASKASAENGIASVQSNSP.....LE.....
  33 MAAKFELYTD.NAGEFRFRLKAGNGENILAS.EGYKQKASAENGIESVKKNAA.....DE.....
  34 MAAKFEIKKA.TNGQYFFHLKSANGEIILAS.ERYEEKGGARTGIASVRENAP.....FD.....
  35 -GRKFEIKRA.SDGQFHFNLKAGNNQVILTS.EMYTTKAAAINGINSVQTNAP.....HD.....
  36 MAGYFELSKS.SDGQFRFVLKAGNHETILTS.ELYKTKAAAENGIESVQKNCG.....DA.....
  37 -IGHYELKKA.KNGQYHFNLKASNGEIILAS.EMYASKASAENGIASVQTNSP.....HE.....
  38 -GKKFELKVA.ANNQFHFNLKAGNGQVILTS.EMYTTKAAALKGINSVQTNAP.....HD.....
  39 MAAKFEIKKA.TNGQYFFHLKSANGEIILAS.ERYEEKGGARTGIASVRENAP.....LD.....
  40 MSGWFELDHS.SNGQYRFVLKAGNAETILSS.ETYTSKDAAENGIESVRKNAP.....LS.....
  41 MAAKFEIKKA.TNGQYFFHLKSANGEIILAS.ERYEEKRGAQTGIASVRENAP.....LD.....
  42 -MGKFVITKR.TNGEFQFNLKAGNGQTILTS.EGYTTKAACTNGIESVKTNSQ.....DD.....
  43 MPGLYELKKN.DSDQFSFALKAENGEVILRS.ELYETKPSAQNGIASVQKNSP.....SD.....
  44 MAGWFELKKA.SNGQFHFALKAGNAETILTS.EMYTAKASAENGIASVQKNSG.....DA.....
  45 MAGKFELKKA.KNDKYFFSLLAGNGQKILAS.EMYDTKASAVGGIESVKKNAA.....DD.....
  46 MSGTFEIYND.KAGEFRFRLKANNGQAILAS.EGYKDKSGCLNGVESVKKNAP.....DD.....
  47 -MGKFVISTR.KNGEFQFSLKAGNGQEILGS.EGYTTKAACLNGVESVKKNSQ.....VD.....
  48 MSGTFEIYND.KAGEFRFRLKANNGQAILAS.EGYKDKSGCLNGVESVKKNAP.....DD.....
  49 MSGWYELSKS.SNGQYKFVLKAANAETILTS.ELYTSRTAAENGIASVQTNSP.....LD.....
  50 -MGKFVITKR.ANGEFQFSLKAGNGQEILGS.EGYKTKDACENGINSVKKNSQ.....DD.....
  51 -AGKFELYQD.KAGEYRFRLKAGNGENILAS.EGYKQKSSAENGIESVRKNAS.....ED.....
  52 MAGWYEVSES.AKGQFRFVLKAGNGEIILTS.ELYKTKASALNGIASVRTNCA.....SD.....
  53 MAARYELFEG.IDEQFYFRLIAANGEQILRS.EGYVSKQGAQNGISSVRVNSP.....LD.....
  54 -LGWYELKLA.KDGQFMFNLKAANSQVILTS.ELYRSRAAAENGIASVQKNGG.....DE.....
  55 MAAKFHLKKA.KDGQFHFNLHAANGEIILTS.ELYKAKDSALNGIDSVRKNAQ.....RD.....
  56 MAAKFHLKKA.KDGQFHFNLHAANGEIILTS.ELYKAKDSALGGIESVRKNSQ.....RD.....
  57 -MGKFEVKTD.KAGKYRFNLKSGNGQVILSS.QGYSSKEACENGIESVKKNSQ.....ND.....
  58 MAGKFELKKG.KTGKFSFNLKSGNGQVVFTS.QTYDSKRSATAGITSVKKNAD.....KD.....
  59 MAAKFHLKKA.KDGQFHFNLHAANGEIILTS.ELYKAKDSALGGIESVRKNSQ.....RD.....
  60 -LGWYELKLA.KDGQFMFNLKAANSQVILTS.ELYRSRSAAENGIASVQKNGL.....DE.....
  61 MAAKFHLKKA.KDGQFHFNLHAANGEIILTS.ELYKAKDSALGGIESVRKNSQ.....RD.....
  62 ----------.NNQKFYFNLKAKNGQIIMSS.QGYADKSGAKNGIESCKKNST.....DD.....
  63 MAGWYELSKS.SDGQFRFVLKDGTGDTLLTS.ELYKARSSAEQGVASVQANSL.....LD.....
  64 -MSGYFVLKA.SGTQYMFNLHAGNHEIILTS.ERYTSKASAQDGIASVQKNAP.....DD.....
  65 ----YDLKKD.KSGKFTFNLKAGNGQVILTG.QSYASKQGAQDGIASVRTHGV.....DD.....
  66 MAAKFHLKKA.KDGQFHFNLHAANGEIILTS.ELYKAKDSALGGIESVRKNSQ.....RD.....
  67 -VGHYDLKRT.KNKQYYFNLKASNGEVILTS.EMYTTKAAANKGIRSVQANSP.....AE.....
  68 ---GYFVLKA.SGTQYMFNLHAGNHEIILTS.ERYTSKASAQDGIASVQKNAP.....DD.....
  69 MAARFQIQQA.RNGKYYFHLLANNGEIILAS.QMYASKSSAKKGILSVQSNAT.....DP.....
  70 --------KE.DGNTYHFVLKAKNGQVILSS.EVYNSKSAASNGIESVKKNSQ.....DD.....
  71 -LGWYELKLA.KDGQFMFNLIAANGQVILTS.ELYKAKASAEKGIESVQKNGV.....NE.....
  72 ---RYELFRSvQNANYYFRLKAGNGEIILQS.EGYLNKGGAENGVESVRRHSP.....MD.....
  73 -------VSS.RNSQYYFRLKSGNSEIILGS.EGYVSKQGCLNGIDSVKANAP.....HD.....
  74 -MGKFEITQD.KSGKFRFKLKARNGQIILSS.QAYTTKSAAEKGIESVKINSN.....NI.....
  75 ----------.-----------------LSS.EQYKAHASALNGIDSVRKNAV.....RE.....
  76 MSAWFELKQY.GSGACRFLLKTKEAQTMLQS.DRYPCRDSAEAALGLFRAHCA.....SP.....
  77 --AKFQTIKD.SSGHYHFNLRLRSGEVVLSSvKKTTQLSDCEKQIALVKENSK.....FA.....
  78 -MGAFVISKR.FNDEYKFVFTSRKGKVIFTS.LSYELRFECEEDIEKFKSTIE.....LA.....
  79 ------YLNE.GESGCRFVVKSAQGHPLLES.VSFPNREDAREQVRLLQPTLR.....DP.....
  80 MAGWFELSKS.SDNQFRFVLKAGNGETILTS.ELYTSKASAEKGIASVRSNS-.....--.....
  81 MSAKFEIYKD.KAGEFRFRLKAANGEIIASS.EGYSSKQACENGIKSVKTNAA.....D-.....
  82 -MARFEIKKS.SNDQYYFVLKANNGQVILQS.ETYTSKQNCNNCIKSIKENAP.....DA.....
  83 MSAKFEIYKD.KAGEFRFRLKAANGEIIASS.EGYSSKQACENGIKSVKTNAA.....D-.....
  84 ---AFIISKR.INDEYKFEFTSRRGKVIFTS.NNFELKFECEDEIEFLKATVG.....DA.....
  85 ---TFEVYED.SAEQYRWRLRHDNGNIIADSgEGYASKQKAEQGLESVKSNAP.....GAy18sk
  86 MAGKFEIYKD.KSNKFRFRLKAGNGEVIAVG.EAYESKAGCLSGIESVRKNAP.....DA.....
  87 --SKFEIYTD.KSGKYRFRLKAKNGEIVATG.QGYATKAGCMNGIKSVKNNAM.....DA.....
  88 MTAKFELFKD.TAGQFRFHLKAANGEIIAAS.QGYTSKAAAQNGIESIKSNA-.....--.....
  89 -MYKFEVFKD.KAGEFRFRFRASNGEIMFSS.EGYKAKASVLNAIESIKKNSP.....GA.....
  90 MAYKFEVYKD.KAGEFRFRFKAPNGETMCSS.EGYKQKASALDAIASVKKNAP.....NA.....
  91 ---AFELYTD.SVDEWRWRLVHDNGNIIADGgGGYSDKRDAKSGIESVQRNAPg18ggSD.....
  92 --YKFEVYKD.KSGEFRFRFKASNGETMFSS.EGYKAKASALNAIDSIKKNSP.....GA.....
  93 --YKFEVFKD.KAGEFRFRFRASNGEIMFSS.EGYKAKASVLNAIESIKKNSP.....GA.....
  94 --YKFEVYKD.KAGEFRFRFKASNGEAMFSS.EGYKAKASAMSAIESIKKNTP.....SA.....
  95 -MSKFEVYLD.EGGKYRFRLRARNGQIIAVS.QGYKSEEGCIKGIQSVKENAP.....NA.....
  96 MASKFELFTD.KKGEFRWRLIASNGQTIADSgEGYTTRANALNGIESVKKNAP.....AA.....
  97 MASKFELFKD.KKGEFRWRLVASNGQTIADSgEGYTTHANAINGIESVKKNAP.....VA.....
  98 --YKFEIYQD.KAGEYRFRFKASNGETMFSS.EGYKAKASAIHAIESIKRNSA.....GA.....
  99 MASKFELFKD.KKGEFRWRLIASNGQTIADSgEGYTTHANAINGIESVKKNAP.....VA.....
 100 --YKFEVYKD.KSGEFRFRFKASNGEAMFSS.EGYKAKASAMSAIESIKKNTP.....GA.....
 101 --YKFEVYKD.KGGEFRFRFKASNGEAMFSS.EGYKAKASAMSAIESIKKNTP.....SA.....
 102 --SKFEVYLD.EGGKYRFRLRARNGQIIAVS.QGYKSEEGCIKGIQSVKENAP.....NA.....
 103 --SKFELYKD.KKGETRFRFRANNGEVMFSS.EGYKAKASAVKAIESLRKNVA.....SA.....
 104 MAHKFEIYKD.KAGEFRVRFKY-NSETIFST.EGYSSKASAQNAIDSIKKNGP.....GA.....
 105 -MMYFSIKKA.SNGQYYFVIRSSNNEIVATS.ETYLTKYSAEKTIESIKND--.....--.....
 106 ---------D.TAQPYYFVLKAANHEIIASS.EMYSTKQAALKGIASVQKNAA.....TD.....
 107 MAGRFEILKD.NDEGYRFRLTAADGTLVAES.PTFTHLEGVIAGINAVRENAA.....TG.....
 108 ----FEIYKD.AKEEFRWRLKAGNHEVIATN.QAYTTKQGCQKGIEAVKK---.....--.....
 109 ---TFEVYED.NAGQWRWRLVHDNGNIIADSgEGYASRQKCEQGIESVKENAP.....GA.....
 110 MAHKFEIYKD.KAGEYRVRFKY-NSEVMFST.EGYSTKAGAQNAIDSIKKNGP.....--.....
 111 MAHKFEIYKD.NAGEFRVRFKH-NNEVMFST.QGYSQKSSAQNAIDSIKKNGP.....D-.....
 112 MSGHFELISA.PDGGYRFRLIGKAGELVAIS.LKYPTKRAAAQGIALVRE---.....--.....
 113 MAHKFEIYKD.KADEYRVRF-SYNSEVMFST.QGYSSKSSAQNAIDSIKKNGP.....D-.....
 114 ---RFEVYED.AAEEWRWRLRADNGELIADSgEGYANRSKAMDAVERVQSYAA.....DA.....
 115 MAHYFEIKKN.KVGEFVAYFKY-NSETIFWT.EGYSSKASAKNAIESIQKNGP.....GA.....
 116 ----FEIYKD.AKGEYRWRLKAANHEIIAQG.EGYTSKQNCQHAVDLLKST--.....--.....
 117 MAGMFELFAD.SDTSFRFQLTAPDGTVMALS.RPFPDKRAAVAGIAAVREY--.....--.....
 118 ----FEIYKD.AKGEYRWRLKAANHEIIAQG.EGYTSKQNCQHAVDLLK----.....--.....
 119 MAHKFLIKKN.KAGEFVAYF-TYNSETIFWT.EGYSDKAGAKNAIASIKKNGP.....DA.....
 120 ----FQIFKG.VNNQWYWRLKAANHEIIAVS.EGYTTKQNCLHCIHLVMDTN-.....--.....
 121 MAHHFKIKKN.KAGEFVAYFM-YNSEAIFWT.EGYSSKASAQNAIESIKKNGP.....GA.....
 122 ---TFELFED.SAGEFRWRLRHDNGNILADSgEGYASKSNVRRALQSVRAHVP.....GA.....
 123 MAHKFLIKKN.KAGEFVAYF-VYNSETIFWT.EGYASKASAKNAIESIKKNGP.....EA.....
 124 ----FQIFQG.VNNQWYWRLKAANHETIAVS.EGYTTKQNCLHCIGLVMDT--.....--.....
 125 MAHRFEIRRN.KAGEFVAYF-CFNNETIFWT.EGYSSKSGAKNAIESILKNGP.....GA.....
 126 ----------.-PTEWRWRLRASNGEIIASG.ESYVHKADCMHAINLVKTTSS.....--.....
 127 ----FVIKKA.SNKKYYFVIKTEENEVIASS.KTYYYKSSVLEIIESIKSDMD.....--.....
 128 ---TFELYED.AGGKYRWRLRHRNANVIADSaQGYSSRQKAMQGLRSVQSNAA.....GG.....


                60          70        80          90       100       11
                |           |         |           |         |         
   1 AR.....YAKEV..AKNDKPYFNLKAANHQIIGT.S.QMYSSTAARDNGIKSVMENGKTTTIKDL
   2 AR.....YERLV..AKNDKPYFNLKAANHQVIGT.S.QFYASEQSRDKGIESVKNNGTTATVKDL
   3 AR.....YERLV..AKNDKPYFNLKAANHQVIGT.S.QFYASEQSRDKGIESVKNNGTTATVKDL
   4 AR.....YDRLT..AKNGKPYFNLKAANHQIIGS.S.QFYASEASRDKGIESVKNNGSSTTIKDL
   5 AR.....YDRLT..AKNGKPYFNLKAANHQIIGS.S.QFYASEASRDKGIESVKNNGSSTTIKDL
   6 AR.....YDRLT..AKNGKPYFNLKAANHQIIGS.S.QFYASEASRDKGIESVKSNGSSTTIKDL
   7 AR.....YAKEV..AKNDKPYFNLKAANHQIIGT.S.QMYSSTAARDNGIKSVMENGKTTTIKDL
   8 ER.....YERKS..AKDGKPYFNLKAANHQIIGN.S.ETYSSEAAREKGIASVKANGPSHNIKDL
   9 AR.....YAKEV..AKNEKPYFNLKAANHQIIGT.S.QMYSSTAARDNGIKSVMENGKTTTIKDL
  10 ER.....YEKKT..ASNGKFYFNLKAANHQIIGS.S.QMYATAQSRETGIASVKANGTSQTVKD-
  11 ER.....YEKKT..ASNGKFYFNLKAANHQIIGS.S.QMYATAQSRETGIASVKVNGTSQTVKD-
  12 ER.....YEKKT..ASNGKFYFNLKAANHQIIGS.S.QMYATAQSRETGIASVKANGTSQTVKD-
  13 ER.....YEKKT..ASNGKFYFNLKAANHQIIGS.S.QMYATAQSRETGIASVKVNGTSQTVKD-
  14 ER.....YEKKT..ASNGKFYFNLKAANHQIIGS.S.QMYATAQSRETGIASVKANGTSQTVKD-
  15 ER.....YEKKT..ASNGKFYFNLKAANHQIIGS.S.QMYATAQSRETGIASVKANGTSQTVKD-
  16 ER.....YEKKT..ASNGKFYFNLKAANHQIIGS.S.QMYATAQSRETGIASVKANGTSQTVKD-
  17 ER.....YEKKT..ASNGKFYFNLKAANHQIIGS.S.QMYATAQSRETGIASVKANGTSQTVKD-
  18 SQ.....YESKR..NVKNEPYFVLKAKNHQVIGV.S.EAYSSEAAAKNGIASVMKNGPTATIKDL
  19 ER.....YEKKT..ASNGKFYFNLKAANHQIIGT.S.QMYATAQSRETGIASVKVNGASQTVKD-
  20 SQ.....YELKH..NTKNEPYFVLKAKNHQVIGI.S.ESYSSEAAAKNGIASVTKNGPTTTIKDL
  21 ER.....YEKKT..ASNGKFYFNLKAANHQIIGS.S.QMYATAQSRETGIASVKANGTSQTVKD-
  22 SQ.....YELKR..NVKNEPYFVLKAKNHQIIGI.S.ESYSSEAAAKNGIASVTKNGPTTTIKDL
  23 ER.....YEKKT..ASNGKFYFNLKAANHQIIGS.S.QMYATAQSRETGIASAKANGTSQTVKD-
  24 SQ.....YELKH..NTKNEPYFVLKAKNHQIIGV.S.ESYSSEAAAKNGIASVMKNGPTTIIKDL
  25 ER.....YERKL..AHNGEPMFNLKAANHQIIGT.S.ETYKTVQGRENGIAAVKRDAPVAETFDL
  26 ER.....YERKL..AHNGEPMFNLKAANHQIIGT.S.ETYKTVQGRENGIAAVKRDAPIAETVDL
  27 AR.....YERKT..TESGKYRFNLKSGNNQVIGT.S.ESYETEKARDGGIESVKKNAPTAVIADM
  28 SQ.....YELKH..NTKNEPYFVLKAKNHQVIGV.S.ESYSSPTAAKNGIASVMKNGLSTVIKDL
  29 SQ.....YELKH..NTKNEPYFVLKAKNHQVIGV.S.ESYSSPTAAKNGIASVMKNGLSTVIKDL
  30 ER.....YEKKT..ASNGKEHFNLKAANHQVIGS.S.QLYASAASRDAGIESVRKNGATTSIKDL
  31 ER.....YERKL..AHNGEPMFNLKAANHQIIGT.S.ETYKTVQGRENGIAAVKRDAPIAETVDL
  32 SQ.....YEVKH..NAKNEPYFVLKAKNHQVIGV.S.EAYSSETAAKNGITSVMKNGPTPTIKDL
  33 AR.....FERKE..TAAGKHMFNLKASNGQVIGT.S.QSYASASGRDGGIESVMRNAPEARIEDL
  34 ER.....YERKI..AHNGEHMFNLKAANHQVIGT.S.ETYKSTQGRDNGIAAVKRDAPAAETFDL
  35 NL.....YDRRE..SKKQEPYFVLKATNGQIIGN.S.EMYSSTSAMENGISSVKTNAPGAPVEDL
  36 AR.....YEKKV..AANGKHHFNLKAANHQIIGS.S.QMYASEAACDNGIESVKTNGKSTTVKDS
  37 AQ.....YEIKH..STSNQPYFVLKAKNHQVIGV.S.EMYSSETAAKNGIQSVIKNGPNTDVRDL
  38 NL.....YDRRE..SKRQEPYFVLKATNGQIIGN.S.EMYSSTSAMENGISSVKTNAPGAPVEDL
  39 ER.....YERKI..AHNGEYMFNLKAANHLVIGT.S.ETYKSTQGRDNGIAAVKRDAPDAETFDL
  40 ER.....YDKEV..STNGKPYFNLKAGNHQIIGT.S.QMYSSEQARDAGIAAVKVNGTTGTVKDK
  41 ER.....YERKV..AHNGEYMFNLKAANRQVIGT.S.ETYKSTQGRDNGIAAVKRDAPVAETFDL
  42 NR.....YDRKE..AKNGKPYFNLKASNGQIIGA.S.EVYESVSARENGIESVKKNAPDAAVDDQ
  43 ER.....YERKT..ASDGRFYFTLKAANHQVIGT.S.PMYKSADARDTGIASVKAHGPSGTVQD-
  44 SR.....YNLAT..ASNGKFYFTLRAANNQIIGN.S.QMYSTEAARNAGIESVKQNGSTQEIRD-
  45 GR.....YERLS..GKDGSPYFTLKAGNGQVIGV.S.EMYASASARDGGIESCKTNAPGAATTDL
  46 AR.....YERKA..SGADKFMFNLKAGNHQVVGT.S.QSYASEASRDKGIESVKNHAPDAKVVE-
  47 TR.....FDRLE..AKNGKPYFNLKATNGQIIGT.S.EMYESVASRDNGIESVKKNAPDATVDDQ
  48 AR.....YERKA..SGADKFMFNLKAGNHQVVGT.S.QSYASEASRDKGIESVKNHAPDAKVVE-
  49 ER.....YEKKS..TKDGHPYFNLKAANHQIIGS.S.ESYSSDAACAKGIASVKANGPSKVIKDK
  50 SK.....FESKK..SKNDKFYFNLKATNGQIIGT.S.EMYETEASCKNGIASVKSNAPAAEIED-
  51 KR.....YERKE..TSSGKHMFNLKAGNGQVIGT.S.QSYTSASGRDNGIESVMRNAPEAKLDDQ
  52 ER.....YEKKE..AENGKFYFNLKAANHEVIGT.S.QMYASKGSRDDGIASVKANGAATTTK--
  53 EQ.....YERKI..STNDQYYFVLKGGNWEIIGV.S.QMYTTRDSRETGIASVKANGPDAPTHDL
  54 KN.....FEFRE..NKNGEPYFILKAQNHQEIGR.S.EYYSSKAAAQNGVNSVMNNAATTVIKDI
  55 GA.....FEVKP..ASNGKFHFVLKATNGQVVGQ.S.QLYASQANAEAGVQSVKRAAPEAGLSD-
  56 GA.....FEVKP..ASNGKFHFVLKATNGQVVGQ.S.QLYASQANAEAGVQSVKRAAPEAGLSD-
  57 AM.....FERDQ..SSSGKPFFNLKAANGQVIGS.S.QMYSSASAMENGIQSVKKNAPGADV---
  58 AR.....YERKS..STKGQPYFVMKATNGQVIGK.S.QMYSNAVSMEKGIKSVGLNAPGADTLDL
  59 GA.....FEVKP..ANNGKFHFVLKATNGQVVGQ.S.QLYASQANAEAGVQSVKRAAPEAGLSD-
  60 KN.....FEVRV..AKNDKPYFVLKAKNHQEIGR.S.QYYSSSVSAKKGIVSVTKNAASTVIKDL
  61 GA.....FEVKP..ANNGKFHFVLKATNGQVVGQ.S.QLYASQANAEAGVQSVKRATPKAGLSD-
  62 SK.....FERKT..AKNGKFHFNLKAGNGQIIGS.S.QMYASEAGMENGIESVKKNAGNAEVKDL
  63 ER.....YERKT..ASNGKAFFNLKAANHQVIGT.S.QMYATEAAREADIARVKAEGASKTVKE-
  64 AR.....YQRLT..AKDGSPYFSLTATNGQSIGR.S.EMYKTTQARDNGIASVKSNAPGAPTKDQ
  65 AN.....FELKT..SVAGEPFFVLKAKNGQIIGK.S.EMYSSTGARDNGVASVKNNSSSTTVNDL
  66 GA.....FEVKP..ANNGKFHFVLKATNGQVVGQ.S.QLYASQANAEAGVQSVKRATPEAGLS--
  67 KN.....FEIRE..NKSGKSYFVLKARNYQVIGI.S.ESYDNEVAVKKGIQSAIKHGSSVNVRDL
  68 AR.....YQRLT..AKDGSPYFSLTATNGQSIGR.S.EMYKTTQARDNGIASVKSNAPGAPTKDQ
  69 SR.....YEALV..NKAGEHYFVLKAKNSLVIGT.S.EGYANSTGMKNGIKSVSRNAPKAITEDI
  70 TK.....FERKT..AKNGKFYFNLKASNGQIIGS.S.QMYAGEAGMENGISSVSENAPNASIK--
  71 AN.....FEFRTtkSEQPQPYFVLKAKNHQEIGR.S.QYYSSPEAAKNGVKSVMNNAATTQIKDK
  72 RC.....YDRKT..STAGQPYFVLNALNGQAIGK.S.QMYSSTYARDRGIESVKANGPNAPLVDL
  73 SR.....YEKK-..DSYQNYTFNLKAANGEIIGR.S.ESYTSSAGRDGGIFAVKHDASSAEIVDL
  74 SR.....IIRKR..SNDGKFYFNLKAANGQIIGT.S.PLYNSKTGREGSIHTL------------
  75 EA.....FEVRE..SSNGKHYFVLKATNGQVIGQ.S.QMYASLHSAEQGCDSVRRHAPNAALQD-
  76 ER.....YVKKI..SSGGKPFFKLKS-GKEVILV.S.HLYDSEATLESAISAIASAGTTERVE--
  77 QR.....FSRES..DDHGS-YFILRDADNVTIGK.S.DYYKYWLDMERSIAAIRSHAGDAEIVD-
  78 RF.....LKFK-..-GSGGKYFFKLMLGDVHFAT.S.RKYTTELLLQKGIKEIVTYASRAEILDF
  79 AI.....FERRT..DHRGRFQFTLRSPGGQVLGH.S.QFYQSEAGMENGIANIRQQ---------
  80 --.....-----..--------------------.-.----------------------------
  81 --.....-----..--------------------.-.----------------------------
  82 E-.....-----..--------------------.-.----------------------------
  83 --.....-----..--------------------.-.----------------------------
  84 VF.....LKFK-..SSRGKFFFRLII-HDKEMAI.S.RKYTTQLLLQKGIDEIIKYASKSEILDF
  85 AT.....FELFK..DSEGKARWRLRHDNGEIIADcG.QGYASKQKAKQGLQSVKTNARGAPV---
  86 AV.....-----..--------------------.-.----------------------------
  87 EI.....VEIET..PSE-----------------.-.----------------------------
  88 --.....-----..--------------------.-.----------------------------
  89 ET.....VD---..--------------------.-.----------------------------
  90 --.....-----..--------------------.-.----------------------------
  91 AT.....FEIFR..DTADEHRWRLRHDNGNVIADgG.QGYASKQKAKQGLNSVKSNAPGAAVE--
  92 DV.....V----..--------------------.-.----------------------------
  93 ET.....VD---..--------------------.-.----------------------------
  94 EI.....VD---..--------------------.-.----------------------------
  95 --.....-----..--------------------.-.----------------------------
  96 PI.....V----..--------------------.-.----------------------------
  97 AI.....V----..--------------------.-.----------------------------
  98 DT.....-----..--------------------.-.----------------------------
  99 P-.....-----..--------------------.-.----------------------------
 100 DV.....V----..--------------------.-.----------------------------
 101 EI.....VD---..--------------------.-.----------------------------
 102 --.....-----..--------------------.-.----------------------------
 103 --.....-----..--------------------.-.----------------------------
 104 E-.....-----..--------------------.-.----------------------------
 105 --.....-----..--------------------.-.----------------------------
 106 E-.....-----..--------------------.-.----------------------------
 107 LI.....V----..--------------------.-.----------------------------
 108 --.....-----..--------------------.-.----------------------------
 109 D-.....-----..--------------------.-.----------------------------
 110 --.....-----..--------------------.-.----------------------------
 111 --.....-----..--------------------.-.----------------------------
 112 --.....-----..--------------------.-.----------------------------
 113 --.....-----..--------------------.-.----------------------------
 114 DLla7aaFEVYE..DKGEEWRWRLRHRNGKIIAD.SgEGYAERNKAVAAIERIKRHAPG------
 115 E-.....-----..--------------------.-.----------------------------
 116 --.....-----..--------------------.-.----------------------------
 117 --.....-----..--------------------.-.----------------------------
 118 --.....-----..--------------------.-.----------------------------
 119 --.....-----..--------------------.-.----------------------------
 120 --.....-----..--------------------.-.----------------------------
 121 E-.....-----..--------------------.-.----------------------------
 122 AYlr7vaYEVYA..DAAGEFRWRLLHRNGNILAD.SgEGYSSRSNARRAARRVSELAPD------
 123 --.....-----..--------------------.-.----------------------------
 124 --.....-----..--------------------.-.----------------------------
 125 EV.....-----..--------------------.-.----------------------------
 126 --.....-----..--------------------.-.----------------------------
 127 --.....-----..--------------------.-.----------------------------
 128 A-.....-----..--------------------.-.----------------------------


      0
     |
   1 T
   2 T
   3 T
   4 T
   5 T
   6 T
   7 T
   8 T
   9 T
  10 -
  11 -
  12 -
  13 -
  14 -
  15 -
  16 -
  17 -
  18 T
  19 -
  20 T
  21 -
  22 T
  23 -
  24 T
  25 -
  26 -
  27 T
  28 T
  29 T
  30 -
  31 -
  32 T
  33 T
  34 -
  35 T
  36 -
  37 -
  38 T
  39 -
  40 -
  41 -
  42 -
  43 -
  44 -
  45 T
  46 -
  47 -
  48 -
  49 -
  50 -
  51 -
  52 -
  53 T
  54 T
  55 -
  56 -
  57 -
  58 T
  59 -
  60 T
  61 -
  62 T
  63 -
  64 -
  65 T
  66 -
  67 T
  68 -
  69 -
  70 -
  71 -
  72 T
  73 T
  74 -
  75 -
  76 -
  77 -
  78 -
  79 -
  80 -
  81 -
  82 -
  83 -
  84 -
  85 -
  86 -
  87 -
  88 -
  89 -
  90 -
  91 -
  92 -
  93 -
  94 -
  95 -
  96 -
  97 -
  98 -
  99 -
 100 -
 101 -
 102 -
 103 -
 104 -
 105 -
 106 -
 107 -
 108 -
 109 -
 110 -
 111 -
 112 -
 113 -
 114 -
 115 -
 116 -
 117 -
 118 -
 119 -
 120 -
 121 -
 122 -
 123 -
 124 -
 125 -
 126 -
 127 -
 128 -