# List of top-scoring protein chains for t2k-w0.5-1-near-backbone-11-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
3bidA	64	2.55e-09		
2f20A	240	10.19	d.303.1.1	132791
1zn6A	227	10.37	d.303.1.1	125373
2gj2A	85	12.28		
1t92A	116	14.55	d.24.1.3	112326
1tqzA	133	22.22	b.55.1.11	119327
1wr3A	36	24.54		
2icuA	229	37.70		
1yf5L	254	45.79	c.55.1.11,c.55.1.11	123049,123050
1wmvA	54	53.31		
1ymzA	43	55.32		
1x7vA	99	57.67	d.58.4.11	109501
1o4uA	285	66.63	c.1.17.1,d.41.2.1	86624,86625
2gz6A	388	67.41		
2bbeA	108	71.49		
2yrlA	102	73.27		
1g8jB	133	74.23	b.33.1.1	24439
2il5A	171	75.49		
1vrtA	560	77.66	c.55.3.1,e.8.1.2	33574,43023