# List of top-scoring protein chains for t2k-w0.5-1-n_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
3bidA	64	4.59e-09		
2f20A	240	12.79	d.303.1.1	132791
1zn6A	227	17.11	d.303.1.1	125373
2icuA	229	20.12		
1gteA	1025	22.18	a.1.2.2,c.1.4.1,c.3.1.1,c.4.1.1,d.58.1.5	70440,70441,70442,70443,70444
1r2zA	274	32.94	a.156.1.2,b.113.1.1,g.39.1.8	96892,96893,96894
2e55A	208	35.23		
1fp3A	402	37.89	a.102.1.3	18842
2gz6A	388	40.21		
1irsA	112	43.09	b.55.1.2	26991
1l1zA	274	43.75	a.156.1.2,b.113.1.1,g.39.1.8	75911,75912,75913
2rp4A	76	43.93		
1tdzA	272	51.17	a.156.1.2,b.113.1.1,g.39.1.8	106787,106788,106789
1txdA	385	60.00	a.87.1.1,b.55.1.1	107422,107423
1gln	468	60.23		
1pjjA	271	62.17	a.156.1.2,b.113.1.1,g.39.1.8	104164,104165,104166
1k82A	268	64.37	a.156.1.2,b.113.1.1,g.39.1.8	75866,75867,75868
1tqzA	133	65.65	b.55.1.11	119327
1k3xA	262	71.33	a.156.1.2,b.113.1.1,g.39.1.8	77242,77243,77244
1wr3A	36	71.96		
1ee8A	266	73.66	a.156.1.2,b.113.1.1,g.39.1.8	75823,75824,75825
2rghA	571	81.72		
2yrlA	102	83.89		
1vliA	385	87.55	b.85.1.1,c.1.10.6	108830,108831
2p0lA	288	89.36		
2e74D	179	89.52	b.33.1.1,f.23.12.1	132049,132050