# List of top-scoring protein chains for t2k-w0.5-1-CB_burial_14_7-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
3bidA	64	3.20e-08		
1t3yA	141	13.34	d.109.1.2	119141
1xauA	122	25.31	b.1.1.4	115041
2gj2A	85	30.06		
1irsA	112	41.05	b.55.1.2	26991
2nnrA	110	46.28		
1kzfA	230	53.17	d.108.1.3	73354
1vfqA	143	54.54	d.109.1.2	120054
1t4oA	117	59.40	d.50.1.1	106425
2gffA	106	61.41		
1t4wA	196	61.77	b.2.5.2	106427
2f20A	240	65.04	d.303.1.1	132791
1cmxA	236	65.91	d.3.1.6	37130
2oa2A	148	68.35		
1x7vA	99	78.53	d.58.4.11	109501
1zt3A	80	81.41		
2e12A	101	82.99		
2bokL	55	84.88	g.3.11.1	128917
3blcA	330	89.26