Best Alignments for T0472

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
3bidA	2.2665e-09	3bidA/T0472-3bidA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dfzA	2.1203e+01	2dfzA/T0472-2dfzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2fa1A	2.8872e+01	2fa1A/T0472-2fa1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.190.1.2
1tqzA	3.0932e+01	1tqzA/T0472-1tqzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.55.1.11
1t4nA	3.2447e+01	1t4nA/T0472-1t4nA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.50.1.1
2rp4A	3.3171e+01	2rp4A/T0472-2rp4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2i79A	3.6221e+01	2i79A/T0472-2i79A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2yhx	4.4712e+01	2yhx/T0472-2yhx-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ursA	5.4342e+01	1ursA/T0472-1ursA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.94.1.1
2f20A	5.6470e+01	2f20A/T0472-2f20A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.303.1.1
1t92A	6.0354e+01	1t92A/T0472-1t92A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.24.1.3
2d4qA	6.7120e+01	2d4qA/T0472-2d4qA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ihoA	7.1139e+01	2ihoA/T0472-2ihoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pz4A	7.3604e+01	2pz4A/T0472-2pz4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ytvA	7.5507e+01	1ytvA/T0472-1ytvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.94.1.1
2gj2A	7.7146e+01	2gj2A/T0472-2gj2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2b9kA	7.7503e+01	2b9kA/T0472-2b9kA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ghaA	7.8407e+01	2ghaA/T0472-2ghaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1w4sA	8.2088e+01	1w4sA/T0472-1w4sA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1cwvA	8.4139e+01	1cwvA/T0472-1cwvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001