Best Alignments for T0472

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
3bidA	3.0247e-09	3bidA/T0472-3bidA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2rghA	1.9936e+01	2rghA/T0472-2rghA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2rp4A	2.5739e+01	2rp4A/T0472-2rp4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2f20A	3.6778e+01	2f20A/T0472-2f20A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.303.1.1
1tqzA	3.9204e+01	1tqzA/T0472-1tqzA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.55.1.11
1t4nA	4.3740e+01	1t4nA/T0472-1t4nA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.50.1.1
1hzfA	6.0184e+01	1hzfA/T0472-1hzfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1h9oA	6.1358e+01	1h9oA/T0472-1h9oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.93.1.1
1p3dA	6.1410e+01	1p3dA/T0472-1p3dA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.5.1.1 c.59.1.1 c.72.2.1
2ghaA	6.9429e+01	2ghaA/T0472-2ghaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2b9kA	6.9834e+01	2b9kA/T0472-2b9kA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gz6A	7.1399e+01	2gz6A/T0472-2gz6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pz4A	7.1583e+01	2pz4A/T0472-2pz4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1wfbA	7.2340e+01	1wfbA/T0472-1wfbA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ijbA	7.3559e+01	1ijbA/T0472-1ijbA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.62.1.1
1fnsA	7.3750e+01	1fnsA/T0472-1fnsA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.62.1.1
1jbwA	7.4324e+01	1jbwA/T0472-1jbwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.59.1.2 c.72.2.2
1eqfA	7.7698e+01	1eqfA/T0472-1eqfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.29.2.1 a.29.2.1
2e7mA	7.9081e+01	2e7mA/T0472-2e7mA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1kwmA	7.9947e+01	1kwmA/T0472-1kwmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.56.5.1 d.58.3.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001