# List of top-scoring protein chains for t04-w0.5-1-near-backbone-11-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
3bidA	64	2.28e-08		
1tqzA	133	12.72	b.55.1.11	119327
2f20A	240	20.42	d.303.1.1	132791
2qr7A	342	24.00		
1grx	85	30.74		
1eqfA	280	30.86	a.29.2.1,a.29.2.1	16972,16973
2gj2A	85	31.18		
1t4nA	94	37.40	d.50.1.1	106424
2rghA	571	40.32		
1fnsA	196	43.14	c.62.1.1	34136
2ghaA	382	46.52		
2q22A	139	47.62		
1atzA	189	52.96	c.62.1.1	34132
1t92A	116	58.76	d.24.1.3	112326
2djlA	314	67.06		
1zn6A	227	81.38	d.303.1.1	125373
2ouwA	138	82.81		
1zotA	358	83.69		
1ijbA	202	86.49	c.62.1.1	71229