Best Alignments for T0472

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
3bidA	1.5923e-09	3bidA/T0472-3bidA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2rp4A	4.5582e+01	2rp4A/T0472-2rp4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2fa1A	4.9704e+01	2fa1A/T0472-2fa1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.190.1.2
2b9kA	5.3788e+01	2b9kA/T0472-2b9kA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1t4nA	6.0566e+01	1t4nA/T0472-1t4nA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.50.1.1
2yhx	6.4411e+01	2yhx/T0472-2yhx-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2p3uA	6.8665e+01	2p3uA/T0472-2p3uA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pr3B	7.1031e+01	2pr3B/T0472-2pr3B-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2rghA	7.6142e+01	2rghA/T0472-2rghA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1nybA	7.7456e+01	1nybA/T0472-1nybA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3ci0I	7.8835e+01	3ci0I/T0472-3ci0I-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1gg1A	8.6398e+01	1gg1A/T0472-1gg1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.10.4
1yk3A	9.0552e+01	1yk3A/T0472-1yk3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
2i79A	9.4867e+01	2i79A/T0472-2i79A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2bz6L	9.6072e+01	2bz6L/T0472-2bz6L-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.3.11.1
1r17A	9.7769e+01	1r17A/T0472-1r17A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.2.3.4 b.2.3.4
2yhxA	9.9153e+01	2yhxA/T0472-2yhxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	i.12.1.1
1yd0A	1.0012e+02	1yd0A/T0472-1yd0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1t4oA	1.0123e+02	1t4oA/T0472-1t4oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.50.1.1
1z6eB	1.0541e+02	1z6eB/T0472-1z6eB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.3.11.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001