# List of top-scoring protein chains for t2k-w0.5-1-o_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
3bidA	64	5.47e-06		
1zn6A	227	37.74	d.303.1.1	125373
2il5A	171	39.63		
2e74D	179	50.04	b.33.1.1,f.23.12.1	132049,132050
2f20A	240	55.03	d.303.1.1	132791
2gffA	106	55.21		
1v8cA	168	57.73	d.15.3.1,d.129.5.1	100495,100496
2c1fA	234	59.13		
1h5zA	455	59.86	a.104.1.1	90622
1gln	468	68.90		
2cibA	455	68.90		
2bbeA	108	73.58		
2iagA	482	75.33		
2bokL	55	76.65	g.3.11.1	128917
1cjxA	357	77.03	d.32.1.3,d.32.1.3	38516,38517
1xe0A	114	77.26	b.121.3.1	115197
2ve3A	444	85.77		
1v9sA	208	88.82	c.61.1.1	119894