# List of top-scoring protein chains for t2k-w0.5-1-n_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
3bidA	64	1.01e-07		
2il5A	171	20.86		
2e74D	179	29.25	b.33.1.1,f.23.12.1	132049,132050
1zn6A	227	30.80	d.303.1.1	125373
2c1fA	234	38.01		
1gln	468	44.00		
1v8cA	168	48.35	d.15.3.1,d.129.5.1	100495,100496
2gffA	106	48.69		
1xe0A	114	50.97	b.121.3.1	115197
2b9kA	47	60.15		
1h5zA	455	60.59	a.104.1.1	90622
2f20A	240	60.69	d.303.1.1	132791
1wr3A	36	71.99		
2e55A	208	72.76		
3claA	213	73.01	c.43.1.1	32610
2cibA	455	73.36		
2bbeA	108	76.23		
1g8jB	133	85.06	b.33.1.1	24439
1r9oA	477	85.77	a.104.1.1	104878
1o7zA	77	86.72	d.9.1.1	86660
1zo4A	473	87.21		
2bokL	55	88.04	g.3.11.1	128917