# List of top-scoring protein chains for t2k-w0.5-1-bys-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
3bidA	64	8.48e-07		
2il5A	171	19.40		
2b9kA	47	30.87		
2bokL	55	38.30	g.3.11.1	128917
1v8cA	168	46.30	d.15.3.1,d.129.5.1	100495,100496
2e74D	179	49.86	b.33.1.1,f.23.12.1	132049,132050
1zn6A	227	52.44	d.303.1.1	125373
2f20A	240	54.38	d.303.1.1	132791
2c1fA	234	68.00		
2gffA	106	68.10		
1izoA	417	73.85	a.104.1.1	83851
2ac1A	541	79.23		
1g8jB	133	86.64	b.33.1.1	24439