Best Alignments for T0472

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
3bidA	2.8422e-09	3bidA/T0472-3bidA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2fa1A	1.9909e+01	2fa1A/T0472-2fa1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.190.1.2
2yhx	2.2524e+01	2yhx/T0472-2yhx-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2rp4A	3.8398e+01	2rp4A/T0472-2rp4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1yk3A	4.5302e+01	1yk3A/T0472-1yk3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
2i79A	4.9841e+01	2i79A/T0472-2i79A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1r17A	5.3680e+01	1r17A/T0472-1r17A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.2.3.4 b.2.3.4
2yhxA	5.4570e+01	2yhxA/T0472-2yhxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	i.12.1.1
2p3uA	6.0157e+01	2p3uA/T0472-2p3uA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pr3B	6.5557e+01	2pr3B/T0472-2pr3B-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3ci0I	6.5772e+01	3ci0I/T0472-3ci0I-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2b9kA	6.6471e+01	2b9kA/T0472-2b9kA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2bz6L	7.0936e+01	2bz6L/T0472-2bz6L-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.3.11.1
1nybA	7.1331e+01	1nybA/T0472-1nybA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1t4nA	7.7959e+01	1t4nA/T0472-1t4nA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.50.1.1
1yloA	8.2350e+01	1yloA/T0472-1yloA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.49.3.1 c.56.5.4
1atzA	8.4040e+01	1atzA/T0472-1atzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.62.1.1
1cwvA	8.8852e+01	1cwvA/T0472-1cwvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1obdA	9.3580e+01	1obdA/T0472-1obdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.143.1.1
2cnqA	9.6458e+01	2cnqA/T0472-2cnqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.143.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001