Best Alignments for T0472

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
3bidA	1.7112e-10	3bidA/T0472-3bidA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2rghA	1.3327e+01	2rghA/T0472-2rghA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1t4nA	2.3841e+01	1t4nA/T0472-1t4nA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.50.1.1
1gg1A	2.4014e+01	1gg1A/T0472-1gg1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.10.4
2rp4A	3.4004e+01	2rp4A/T0472-2rp4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1of8A	3.8502e+01	1of8A/T0472-1of8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.10.4
1fsuA	3.9351e+01	1fsuA/T0472-1fsuA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.76.1.2
1wocA	4.0480e+01	1wocA/T0472-1wocA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2b9kA	4.1926e+01	2b9kA/T0472-2b9kA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1fnsA	4.3939e+01	1fnsA/T0472-1fnsA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.62.1.1
2pr3B	4.7608e+01	2pr3B/T0472-2pr3B-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2p3uA	4.9391e+01	2p3uA/T0472-2p3uA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1nybA	5.5394e+01	1nybA/T0472-1nybA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qztA	6.0204e+01	2qztA/T0472-2qztA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1yd0A	6.2765e+01	1yd0A/T0472-1yd0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1t4oA	6.2810e+01	1t4oA/T0472-1t4oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.50.1.1
3ci0I	6.5224e+01	3ci0I/T0472-3ci0I-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2a8eA	6.5587e+01	2a8eA/T0472-2a8eA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.296.1.1
1h9oA	6.7935e+01	1h9oA/T0472-1h9oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.93.1.1
1fjsL	7.0367e+01	1fjsL/T0472-1fjsL-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.3.11.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001