PFRMAT RR TARGET T0472 AUTHOR 4008-1775-0004 REMARK From group SAM-TO6 under the direction of REMARK Kevin Karplus. REMARK Residue-residue contact predictions REMARK by George Shackelford and Kevin Karplus REMARK The value given is an approximation of the probability REMARK as provided by the neural network. REMARK The predictions are limited to a score >= .18 which REMARK is an approximation of the probability. REMARK METHOD The predictor is an artificial neural network. METHOD NN: con.aa7str2_7near3nsep5.47.data03.net METHOD Inputs may include separation and sequence length, METHOD e-value statistic based on mutual information values, METHOD a statistic based on propensity of residues in contact. METHOD Other inputs are distributions from alignments and METHOD secondary predictions from SAM-t04 and/or SAM-t06 of METHOD the University of California, Santa Cruz REMARK REMARK Starting column is 51 MODEL 1 PIEARYAKEVAKNDKPYFNLKAANHQIIGTSQMYSSTAARDNGIKSVMEN GKTTTIKDLT 54 63 0 8 0.576931 54 64 0 8 0.393578 54 66 0 8 0.427025 54 67 0 8 0.515909 54 68 0 8 0.763545 54 69 0 8 0.917687 54 70 0 8 0.874553 54 71 0 8 0.883498 54 72 0 8 0.843163 54 73 0 8 0.80397 54 74 0 8 0.746289 54 75 0 8 0.511589 54 76 0 8 0.484778 54 77 0 8 0.527121 54 78 0 8 0.602669 54 79 0 8 0.757274 54 80 0 8 0.77401 54 81 0 8 0.690197 54 82 0 8 0.671448 54 83 0 8 0.593811 54 84 0 8 0.549652 54 85 0 8 0.44566 54 86 0 8 0.412789 54 87 0 8 0.423104 54 89 0 8 0.413586 54 90 0 8 0.538414 54 93 0 8 0.389386 54 94 0 8 0.372885 54 96 0 8 0.508968 54 100 0 8 0.475175 54 101 0 8 0.48623 54 102 0 8 0.436617 54 106 0 8 0.469701 54 107 0 8 0.429328 55 64 0 8 0.377787 55 66 0 8 0.426873 55 67 0 8 0.610698 55 68 0 8 0.900191 55 69 0 8 0.959457 55 70 0 8 0.94397 55 71 0 8 0.911313 55 72 0 8 0.877975 55 73 0 8 0.786155 55 74 0 8 0.726597 55 75 0 8 0.534716 55 76 0 8 0.539936 55 77 0 8 0.644508 55 78 0 8 0.770267 55 79 0 8 0.855719 55 80 0 8 0.830457 55 81 0 8 0.762527 55 82 0 8 0.703503 55 83 0 8 0.612229 55 84 0 8 0.578761 55 85 0 8 0.460108 55 86 0 8 0.411317 55 87 0 8 0.446309 55 89 0 8 0.426378 55 90 0 8 0.644656 55 92 0 8 0.403728 55 93 0 8 0.459778 55 94 0 8 0.508742 55 96 0 8 0.621747 55 97 0 8 0.477051 55 98 0 8 0.403723 55 100 0 8 0.505072 55 101 0 8 0.503502 55 102 0 8 0.415797 55 105 0 8 0.402009 55 106 0 8 0.601886 55 107 0 8 0.551387 56 66 0 8 0.686066 56 67 0 8 0.8641 56 68 0 8 0.978623 56 69 0 8 0.990351 56 70 0 8 0.991154 56 71 0 8 0.94702 56 72 0 8 0.959415 56 73 0 8 0.796905 56 74 0 8 0.798089 56 75 0 8 0.651761 56 76 0 8 0.725438 56 77 0 8 0.88493 56 78 0 8 0.950445 56 79 0 8 0.962423 56 80 0 8 0.903879 56 81 0 8 0.863805 56 82 0 8 0.761387 56 83 0 8 0.673328 56 84 0 8 0.722465 56 85 0 8 0.520473 56 86 0 8 0.471947 56 87 0 8 0.546419 56 88 0 8 0.383727 56 89 0 8 0.593827 56 90 0 8 0.854667 56 91 0 8 0.394659 56 92 0 8 0.568164 56 93 0 8 0.730003 56 94 0 8 0.816077 56 95 0 8 0.377854 56 96 0 8 0.81714 56 97 0 8 0.836991 56 98 0 8 0.62021 56 100 0 8 0.713408 56 101 0 8 0.7301 56 102 0 8 0.454108 56 104 0 8 0.39958 56 105 0 8 0.41329 56 106 0 8 0.804161 56 107 0 8 0.649491 57 66 0 8 0.552042 57 67 0 8 0.849777 57 68 0 8 0.944981 57 69 0 8 0.977738 57 70 0 8 0.956603 57 71 0 8 0.910275 57 72 0 8 0.855683 57 73 0 8 0.766718 57 74 0 8 0.789341 57 75 0 8 0.767743 57 76 0 8 0.746904 57 77 0 8 0.789366 57 78 0 8 0.859034 57 79 0 8 0.90164 57 80 0 8 0.861407 57 81 0 8 0.705588 57 82 0 8 0.660457 57 83 0 8 0.479164 57 84 0 8 0.445781 57 90 0 8 0.517731 57 93 0 8 0.420864 57 94 0 8 0.45141 57 96 0 8 0.472254 57 100 0 8 0.504511 57 101 0 8 0.465181 57 106 0 8 0.578922 57 107 0 8 0.475269 58 67 0 8 0.884116 58 68 0 8 0.967857 58 69 0 8 0.97828 58 70 0 8 0.958305 58 71 0 8 0.858628 58 72 0 8 0.824567 58 73 0 8 0.610586 58 74 0 8 0.735784 58 75 0 8 0.792595 58 76 0 8 0.763154 58 77 0 8 0.812557 58 78 0 8 0.864908 58 79 0 8 0.882115 58 80 0 8 0.782934 58 81 0 8 0.640193 58 82 0 8 0.531361 58 83 0 8 0.436156 58 84 0 8 0.471177 58 90 0 8 0.559695 58 93 0 8 0.441318 58 94 0 8 0.524639 58 96 0 8 0.524234 58 97 0 8 0.415887 58 100 0 8 0.451412 58 101 0 8 0.393572 58 106 0 8 0.615819 58 107 0 8 0.439581 59 68 0 8 0.954431 59 69 0 8 0.953711 59 70 0 8 0.889284 59 71 0 8 0.760561 59 72 0 8 0.652658 59 73 0 8 0.456713 59 74 0 8 0.645459 59 75 0 8 0.763269 59 76 0 8 0.787919 59 77 0 8 0.779387 59 78 0 8 0.807182 59 79 0 8 0.795078 59 80 0 8 0.663074 59 81 0 8 0.5336 59 82 0 8 0.444092 59 83 0 8 0.390599 59 84 0 8 0.432484 59 90 0 8 0.461217 59 94 0 8 0.392196 59 96 0 8 0.41711 59 100 0 8 0.382055 59 106 0 8 0.576514 59 107 0 8 0.442648 60 69 0 8 0.872849 60 70 0 8 0.722663 60 71 0 8 0.465581 60 72 0 8 0.507874 60 74 0 8 0.64766 60 75 0 8 0.715684 60 76 0 8 0.661109 60 77 0 8 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