Best Alignments for T0472

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
3bidA	3.4449e-09	3bidA/T0472-3bidA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2fa1A	1.1960e+01	2fa1A/T0472-2fa1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.190.1.2
2yhx	1.6127e+01	2yhx/T0472-2yhx-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2i79A	2.9294e+01	2i79A/T0472-2i79A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2b9kA	3.1529e+01	2b9kA/T0472-2b9kA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1yk3A	3.1608e+01	1yk3A/T0472-1yk3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
2yhxA	3.6691e+01	2yhxA/T0472-2yhxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	i.12.1.1
1t4nA	4.7815e+01	1t4nA/T0472-1t4nA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.50.1.1
2bz6L	4.9490e+01	2bz6L/T0472-2bz6L-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.3.11.1
2p3uA	5.0988e+01	2p3uA/T0472-2p3uA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pr3B	5.1127e+01	2pr3B/T0472-2pr3B-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2rp4A	5.2230e+01	2rp4A/T0472-2rp4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1atzA	6.0039e+01	1atzA/T0472-1atzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.62.1.1
2d4qA	6.3405e+01	2d4qA/T0472-2d4qA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3ci0I	6.6510e+01	3ci0I/T0472-3ci0I-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1nybA	7.2842e+01	1nybA/T0472-1nybA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1vjuA	7.3273e+01	1vjuA/T0472-1vjuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.248.1.1
1yloA	7.3366e+01	1yloA/T0472-1yloA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.49.3.1 c.56.5.4
1t4oA	8.1403e+01	1t4oA/T0472-1t4oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.50.1.1
1k8kD	8.1528e+01	1k8kD/T0472-1k8kD-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.198.2.1 d.198.2.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001