# List of top-scoring protein chains for t06-w0.5-1-n_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
3bidA	64	8.32e-09		
2fa1A	160	4.687	d.190.1.2	133182
2yhx	457	6.609		
1yk3A	210	11.48	d.108.1.1	123493
2b9kA	47	12.53		
2i79A	172	13.00		
2bz6L	53	14.22	g.3.11.1	129553
2yhxA	457	16.22	i.12.1.1	46024
2p3uA	52	18.16		
2pr3B	51	21.02		
1yloA	348	25.80	b.49.3.1,c.56.5.4	123659,123660
1z6eB	52	25.89	g.3.11.1	124519
2bokL	55	32.86	g.3.11.1	128917
1vi3A	170	36.57	b.17.1.2	100730
2rp4A	76	36.82		
3pcgA	200	37.31	b.3.6.1	22647
2dfzA	381	39.36		
1atzA	189	39.56	c.62.1.1	34132
3ci0I	89	43.78		
1obdA	306	50.92	d.143.1.1	86767
2zdiC	151	51.41		
2it1A	362	53.32		
2cnqA	306	56.17	d.143.1.1	130646
1fs0E	138	57.77	a.2.10.1,b.93.1.1	59997,59998
2icuA	229	59.27		
2d4qA	257	60.93		
3b5lB	198	65.05		
1r17A	343	66.94	b.2.3.4,b.2.3.4	96796,96797
1k8kD	300	67.65	d.198.2.1,d.198.2.1	68309,68310
1t4nA	94	67.85	d.50.1.1	106424
2yrlA	102	71.46		
2a28A	54	72.25		
2qzuA	491	73.31		
2r6gF	514	73.78		
1vjuA	309	75.95	d.248.1.1	100835
1z47A	355	76.95		
2p19A	149	83.27		
1lq9A	112	83.30	d.58.4.3	78129
2prbA	196	87.17		
2p5qA	170	89.45