Best Alignments for T0472

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
3bidA	2.2435e-10	3bidA/T0472-3bidA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2rghA	8.4254e+00	2rghA/T0472-2rghA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1gg1A	1.6344e+01	1gg1A/T0472-1gg1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.10.4
2b9kA	2.0696e+01	2b9kA/T0472-2b9kA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1of8A	2.5119e+01	1of8A/T0472-1of8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.10.4
1t4nA	2.5685e+01	1t4nA/T0472-1t4nA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.50.1.1
2pr3B	2.8381e+01	2pr3B/T0472-2pr3B-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2p3uA	3.4864e+01	2p3uA/T0472-2p3uA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2rp4A	3.5915e+01	2rp4A/T0472-2rp4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1fjsL	3.9621e+01	1fjsL/T0472-1fjsL-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.3.11.1
2qztA	3.9676e+01	2qztA/T0472-2qztA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2f20A	4.1550e+01	2f20A/T0472-2f20A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.303.1.1
1fnsA	4.4004e+01	1fnsA/T0472-1fnsA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.62.1.1
1z6eB	4.5295e+01	1z6eB/T0472-1z6eB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.3.11.1
1nybA	5.5013e+01	1nybA/T0472-1nybA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1fsuA	5.5042e+01	1fsuA/T0472-1fsuA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.76.1.2
2bz6L	5.5473e+01	2bz6L/T0472-2bz6L-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.3.11.1
2bokL	5.6029e+01	2bokL/T0472-2bokL-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.3.11.1
1kliL	5.8450e+01	1kliL/T0472-1kliL-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.3.11.1
1zn6A	6.1456e+01	1zn6A/T0472-1zn6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.303.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001