Best Alignments for T0471

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1fp1D	1.1238e+00	1fp1D/T0471-1fp1D-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.29 c.66.1.12
1qzzA	2.0788e+00	1qzzA/T0471-1qzzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.29 c.66.1.12
1fp2A	2.4397e+00	1fp2A/T0471-1fp2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.29 c.66.1.12
1ve3A	2.5385e+00	1ve3A/T0471-1ve3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.66.1.43
1im8A	3.8774e+00	1im8A/T0471-1im8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.66.1.14
1lssA	4.4215e+00	1lssA/T0471-1lssA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.2.1.9
2avnA	4.5944e+00	2avnA/T0471-2avnA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.66.1.41
2nxcA	5.0856e+00	2nxcA/T0471-2nxcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.66.1.39
1tw3A	5.8613e+00	1tw3A/T0471-1tw3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.29 c.66.1.12
2r3sA	6.1772e+00	2r3sA/T0471-2r3sA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3c85A	6.7005e+00	3c85A/T0471-3c85A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ip2A	6.9678e+00	2ip2A/T0471-2ip2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1x19A	7.2209e+00	1x19A/T0471-1x19A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3d2lA	7.3362e+00	3d2lA/T0471-3d2lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2hmvA	7.6084e+00	2hmvA/T0471-2hmvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.2.1.9
2p8jA	8.3815e+00	2p8jA/T0471-2p8jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2fk8A	9.8161e+00	2fk8A/T0471-2fk8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.66.1.18
1kpgA	1.0276e+01	1kpgA/T0471-1kpgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.66.1.18
2pxxA	1.0609e+01	2pxxA/T0471-2pxxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1kyzA	1.0914e+01	1kyzA/T0471-1kyzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.29 c.66.1.12

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001