Best Alignments for T0471

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1lssA	2.9459e+00	1lssA/T0471-1lssA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.2.1.9
3cggA	4.7691e+00	3cggA/T0471-3cggA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1pjzA	5.5406e+00	1pjzA/T0471-1pjzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.66.1.36
3c85A	6.5992e+00	3c85A/T0471-3c85A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2bzgA	8.7375e+00	2bzgA/T0471-2bzgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.66.1.36
2i6gA	9.6044e+00	2i6gA/T0471-2i6gA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.66.1.44
1ez1A	9.9957e+00	1ez1A/T0471-1ez1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.84.2.1 c.30.1.1 d.142.1.2
2g1uA	1.1935e+01	2g1uA/T0471-2g1uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1jq5A	1.4679e+01	1jq5A/T0471-1jq5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	e.22.1.2
2ogyA	1.5120e+01	2ogyA/T0471-2ogyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1j77A	1.8887e+01	1j77A/T0471-1j77A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1xuuA	2.1175e+01	1xuuA/T0471-1xuuA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2yxdA	2.1335e+01	2yxdA/T0471-2yxdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pn1A	2.2755e+01	2pn1A/T0471-2pn1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2hmvA	2.3967e+01	2hmvA/T0471-2hmvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.2.1.9
2ex4A	2.4350e+01	2ex4A/T0471-2ex4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.66.1.42
1sk7A	2.4601e+01	1sk7A/T0471-1sk7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ad1A	2.5942e+01	1ad1A/T0471-1ad1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.21.1
2jhfA	2.6124e+01	2jhfA/T0471-2jhfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.35.1.2 c.2.1.1
1f6yA	2.6782e+01	1f6yA/T0471-1f6yA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.21.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001