# List of top-scoring protein chains for T0471.t2k-w0.5 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1w78A	422	16.75		
1uf5A	303	22.03	d.160.1.2	107808
1fo6A	304	29.68	d.160.1.2	59923
2ggkA	304	29.68	d.160.1.2	135144
2gglA	304	29.87	d.160.1.2	135148
1erzA	303	30.61	d.160.1.2	59498
1rjwA	339	37.83	b.35.1.2,c.2.1.1	97582,97583
1epuA	591	46.10	e.25.1.1	43358
1thoA	109	54.45	c.47.1.1	32722
1zx0A	236	72.06	c.66.1.16	125757
1o5zA	442	78.80	c.59.1.2,c.72.2.2	92530,92531
1khhA	198	82.59	c.66.1.16	68615
2bg9A	370	83.08		
1p1cA	199	83.11	c.66.1.16	87669
2qv6A	268	84.98		
1xclA	235	87.58	c.66.1.16	115127