# List of top-scoring protein chains for T0471.t06-w0.5 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1rjwA	339	14.52	b.35.1.2,c.2.1.1	97582,97583
1pjtA	457	18.17	c.2.1.11,c.90.1.1,e.37.1.1	94778,94779,94780
1pjqA	457	18.33	c.2.1.11,c.90.1.1,e.37.1.1	94766,94767,94768
2avnA	260	26.63	c.66.1.41	127380
2dldA	337	30.79	c.2.1.4,c.23.12.1	30099,31359
1zkdA	387	31.65	c.66.1.52	125184
1w78A	422	45.99		
1yzhA	214	48.28	c.66.1.53	124277
2b3tA	276	48.65	c.66.1.30	127796
1t43A	277	48.91	c.66.1.30	106392
1uf5A	303	51.98	d.160.1.2	107808
2bgkA	278	52.96	c.2.1.2	128480
2bg9A	370	55.47		
1erzA	303	56.95	d.160.1.2	59498
3cggA	195	57.00		
2dpoA	319	64.49		
1fo6A	304	76.26	d.160.1.2	59923
2ggkA	304	76.26	d.160.1.2	135144
2gglA	304	77.02	d.160.1.2	135148
1jg1A	235	80.53	c.66.1.7	66661
1j4aA	333	84.95	c.2.1.4,c.23.12.1	71502,71503
1j49A	333	84.95	c.2.1.4,c.23.12.1	71498,71499
3bofA	566	88.63