Best Alignments for T0471

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1h2bA	9.2387e-01	1h2bA/T0471-1h2bA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.35.1.2 c.2.1.1
1fp1D	1.1596e+00	1fp1D/T0471-1fp1D-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.29 c.66.1.12
2avnA	1.5162e+00	2avnA/T0471-2avnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.66.1.41
1fp2A	2.1349e+00	1fp2A/T0471-1fp2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.29 c.66.1.12
1ve3A	2.1468e+00	1ve3A/T0471-1ve3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.66.1.43
1qorA	2.8540e+00	1qorA/T0471-1qorA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.35.1.2 c.2.1.1
1qzzA	3.2272e+00	1qzzA/T0471-1qzzA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.29 c.66.1.12
1l7dA	4.9445e+00	1l7dA/T0471-1l7dA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.2.1.4 c.23.12.2
1x13A	6.0274e+00	1x13A/T0471-1x13A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2nxcA	6.2377e+00	2nxcA/T0471-2nxcA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.66.1.39
1lssA	6.2925e+00	1lssA/T0471-1lssA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.2.1.9
1f6yA	7.5707e+00	1f6yA/T0471-1f6yA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.21.2
2h1rA	9.2262e+00	2h1rA/T0471-2h1rA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1im8A	9.2777e+00	1im8A/T0471-1im8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.66.1.14
1pjcA	9.4186e+00	1pjcA/T0471-1pjcA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.2.1.4 c.23.12.2
1jvbA	1.0607e+01	1jvbA/T0471-1jvbA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.35.1.2 c.2.1.1
1kjqA	1.0869e+01	1kjqA/T0471-1kjqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.84.2.1 c.30.1.1 d.142.1.2
2hmvA	1.1129e+01	2hmvA/T0471-2hmvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.2.1.9
1ri5A	1.1275e+01	1ri5A/T0471-1ri5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.66.1.34
2aefA	1.1437e+01	2aefA/T0471-2aefA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001