Best Alignments for T0470

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2qgsA	7.0855e-29	2qgsA/T0470-2qgsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3b57A	4.0315e-22	3b57A/T0470-3b57A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pq7A	1.0607e-19	2pq7A/T0470-2pq7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3ccgA	2.1067e-16	3ccgA/T0470-3ccgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2o08A	4.1022e-16	2o08A/T0470-2o08A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ogiA	5.7802e-16	2ogiA/T0470-2ogiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2hekA	4.7122e-11	2hekA/T0470-2hekA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.211.1.1
1vqrA	5.9595e-11	1vqrA/T0470-1vqrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.211.1.3
2dqbA	9.1053e-10	2dqbA/T0470-2dqbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2q14A	1.2571e-09	2q14A/T0470-2q14A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pgsA	8.4472e-07	2pgsA/T0470-2pgsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2paqA	4.2280e-06	2paqA/T0470-2paqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.211.1.1
1xx7A	7.4725e-06	1xx7A/T0470-1xx7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.211.1.1
3bg2A	8.9896e-06	3bg2A/T0470-3bg2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2parA	1.0885e-05	2parA/T0470-2parA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ynbA	8.6753e-04	1ynbA/T0470-1ynbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.211.1.1
1y2kA	1.1855e-03	1y2kA/T0470-1y2kA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.211.1.2
1zklA	1.2202e-03	1zklA/T0470-1zklA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2hd1A	1.7847e-03	2hd1A/T0470-2hd1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.211.1.2
1tazA	1.8074e-03	1tazA/T0470-1tazA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.211.1.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001