Best Alignments for T0470

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2qgsA	3.1187e-33	2qgsA/T0470-2qgsA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3b57A	4.9194e-27	3b57A/T0470-3b57A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pq7A	2.9067e-18	2pq7A/T0470-2pq7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ogiA	1.1527e-05	2ogiA/T0470-2ogiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3ccgA	4.3269e-05	3ccgA/T0470-3ccgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2o08A	1.0939e-04	2o08A/T0470-2o08A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1xx7A	2.0862e-03	1xx7A/T0470-1xx7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.211.1.1
2dqbA	6.7873e-03	2dqbA/T0470-2dqbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2hekA	2.0143e-02	2hekA/T0470-2hekA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.211.1.1
1ynbA	2.4535e-02	1ynbA/T0470-1ynbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.211.1.1
2paqA	2.8360e-02	2paqA/T0470-2paqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.211.1.1
2parA	3.3189e-02	2parA/T0470-2parA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1vqrA	1.5005e-01	1vqrA/T0470-1vqrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.211.1.3
2q14A	1.5737e-01	2q14A/T0470-2q14A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1yoyA	2.9110e-01	1yoyA/T0470-1yoyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.211.1.1
1u6zA	1.0486e+00	1u6zA/T0470-1u6zA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.211.1.5 c.55.1.8 c.55.1.8
2pgsA	1.7991e+00	2pgsA/T0470-2pgsA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1rkpA	2.1433e+00	1rkpA/T0470-1rkpA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.211.1.2
1miwA	2.7512e+00	1miwA/T0470-1miwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.173.1.1 d.218.1.4
1vj7A	2.9230e+00	1vj7A/T0470-1vj7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.211.1.1 d.218.1.8

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001