Best Alignments for T0470

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2qgsA/T0470-2qgsA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2qgsA/T0470-2qgsA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7094e-281.85e-118
3b57A/T0470-3b57A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3b57A/T0470-3b57A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0855e-252.90e-106
2pq7A/T0470-2pq7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2pq7A/T0470-2pq7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7209e-197.27e-82
2pjqA/T0470-2pjqA-t2k-global-adpstyle1.a2m 2pjqA/T0470-2pjqA-t2k-global-adpstyle1.al 6.6203e-134.16e-76
2o08A/T0470-2o08A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2o08A/T0470-2o08A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6804e-072.21e-36
2ogiA/T0470-2ogiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ogiA/T0470-2ogiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1632e-061.38e-27
3ccgA/T0470-3ccgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3ccgA/T0470-3ccgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8591e-052.84e-28
2hekA/T0470-2hekA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2hekA/T0470-2hekA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8841e-047.24e-24 a.211.1.1
2dqbA/T0470-2dqbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2dqbA/T0470-2dqbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.2830e-034.42e-21
2hd1A/T0470-2hd1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2hd1A/T0470-2hd1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7318e-024.97e-24 a.211.1.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001