PFRMAT SS
TARGET T0470
METHOD Using neural net t2k-5651-IDaaHr-5-15-7-15-9-15-13-ebghtl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    6 (1 EBGHTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0470.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 240
METHOD
MODEL 1
M C 0.663
T C 0.698
K H 0.887
Q H 0.938
E H 0.943
K H 0.961
I H 0.973
E H 0.976
K H 0.978
T H 0.981
I H 0.991
T H 0.989
F H 0.993
V H 0.988
K H 0.979
H H 0.945
I H 0.864
L H 0.700
E H 0.475
K T 0.444
D T 0.564
A T 0.461
S T 0.505
G T 0.383
H C 0.428
D C 0.528
W H 0.963
Y H 0.985
H H 0.992
I H 0.998
R H 0.999
R H 0.999
V H 0.999
H H 0.999
K H 0.995
M H 0.994
A H 0.994
I H 0.988
S H 0.991
L H 0.992
S H 0.985
E H 0.980
Q H 0.942
E H 0.802
G C 0.879
G C 0.863
N C 0.925
R H 0.897
F H 0.985
I H 0.999
I H 1.000
E H 1.000
M H 1.000
A H 1.000
A H 0.998
L H 0.993
L H 0.971
H H 0.796
D H 0.718
V H 0.626
A H 0.426
D C 0.345
E T 0.391
K T 0.394
L T 0.421
N T 0.414
E C 0.430
S T 0.389
E H 0.351
E H 0.519
A H 0.679
G H 0.754
M H 0.925
K H 0.935
K H 0.969
V H 0.985
S H 0.986
D H 0.990
W H 0.991
L H 0.980
E H 0.958
E H 0.924
L H 0.794
H C 0.931
V C 0.908
E C 0.924
E H 0.881
E H 0.917
E H 0.962
S H 0.997
K H 0.999
H H 0.999
V H 1.000
L H 1.000
H H 1.000
I H 0.999
I H 0.997
A H 0.990
N H 0.970
M H 0.889
S H 0.432
Y H 0.309
K T 0.387
G T 0.438
G T 0.494
H T 0.507
G T 0.480
G T 0.439
K C 0.433
V C 0.625
E C 0.705
S C 0.816
I H 0.969
E H 0.978
G H 0.970
K H 0.969
L H 0.980
V H 0.967
Q H 0.954
D H 0.941
A H 0.998
D H 0.996
R H 0.989
L H 0.986
D H 0.968
A H 0.868
L H 0.787
G C 0.418
A C 0.426
I H 0.795
G H 0.890
I H 0.979
A H 0.983
R H 0.993
T H 0.989
F H 0.979
A H 0.964
Y H 0.934
G H 0.919
G H 0.566
A H 0.475
K T 0.510
G T 0.557
R T 0.483
L C 0.388
M T 0.359
Y C 0.435
D T 0.750
P T 0.790
T T 0.825
I T 0.798
P C 0.438
P T 0.392
R T 0.483
E T 0.419
V T 0.389
M C 0.349
T C 0.445
K H 0.532
D H 0.517
E H 0.461
Y H 0.399
R H 0.432
K T 0.334
N C 0.353
N H 0.565
D H 0.773
P H 0.852
S H 0.928
L H 0.981
N H 0.988
H H 0.989
F H 0.993
Y H 0.993
E H 0.990
K H 0.981
L H 0.970
L H 0.952
K H 0.703
L H 0.682
K H 0.564
D G 0.455
L H 0.525
M H 0.612
N C 0.405
T C 0.579
N H 0.898
A H 0.947
A H 0.960
K H 0.987
Q H 0.985
E H 0.992
A H 0.992
E H 0.991
V H 0.987
R H 0.991
H H 0.995
R H 0.995
Y H 0.993
M H 0.991
E H 0.995
Q H 0.991
F H 0.993
I H 0.994
E H 0.994
Q H 0.994
F H 0.989
M H 0.979
K H 0.921
E H 0.779
W H 0.635
N H 0.397
A T 0.407
Q T 0.477
I T 0.413
L T 0.371
E T 0.404
H T 0.377
H T 0.358
H C 0.355
H C 0.527
H C 0.699
H C 0.960
END