Best Alignments for T0468

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
3buuA	2.0343e+01	3buuA/T0468-3buuA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1pm1X	2.2758e+01	1pm1X/T0468-1pm1X-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.60.1.1
2v1oA	2.9458e+01	2v1oA/T0468-2v1oA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2bw2A	3.3989e+01	2bw2A/T0468-2bw2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1bb8	3.4813e+01	1bb8/T0468-1bb8-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1adwA	4.1815e+01	1adwA/T0468-1adwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.6.1.1
1z45A	4.2138e+01	1z45A/T0468-1z45A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.30.5.4 c.2.1.2
1yliA	4.3012e+01	1yliA/T0468-1yliA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.38.1.1
1vpmA	4.4443e+01	1vpmA/T0468-1vpmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.38.1.1
2j22A	4.6986e+01	2j22A/T0468-2j22A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1v0aA	4.9741e+01	1v0aA/T0468-1v0aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.18.1.30
1bqk	5.0265e+01	1bqk/T0468-1bqk-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bjkA	5.3320e+01	3bjkA/T0468-3bjkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1xyiA	5.5962e+01	1xyiA/T0468-1xyiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2rb6A	5.6469e+01	2rb6A/T0468-2rb6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1azpA	5.7347e+01	1azpA/T0468-1azpA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.13.1
1b69A	5.7947e+01	1b69A/T0468-1b69A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.10.1.1
1snzA	6.5323e+01	1snzA/T0468-1snzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.30.5.4
1bhgA	6.6284e+01	1bhgA/T0468-1bhgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.4.1 b.18.1.5 c.1.8.3
2q2bA	6.6758e+01	2q2bA/T0468-2q2bA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001