# List of top-scoring protein chains for t2k-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1z45A	699	8.855	b.30.5.4,c.2.1.2	124427,124428
3buuA	229	12.26		
1bb8	71	12.78		
1pm1X	180	14.40	b.60.1.1	104189
1v0aA	178	15.14	b.18.1.30	119815
2bw2A	140	17.27		
1snzA	344	19.12	b.30.5.4	98930
1bhgA	613	20.09	b.1.4.1,b.18.1.5,c.1.8.3	22161,23766,28889
1bqk	124	30.53		
1b69A	69	30.68	d.10.1.1	37479
1p4uA	153	33.20	b.1.10.2	87780
2v1oA	151	39.50		
1adwA	123	40.88	b.6.1.1	22893
1te7A	103	42.22	b.122.1.7	112404
1y0bA	197	47.49	c.61.1.1	122476
1bb8A	71	50.58	d.10.1.1	37478
1pg6A	243	52.82	b.82.5.2	94673
2e63A	170	56.25		
2rb6A	61	56.82		
2h2zA	306	57.97		
2a7bA	120	68.58	b.1.10.2	126333
1azpA	66	72.29	b.34.13.1	37467
1xyiA	66	72.89		
1k66A	149	75.38	c.23.1.1	90941
1iu1A	146	78.25	b.1.10.2	71428
1bdsA	43	79.96	g.9.1.1	44596
1bf4A	63	80.65	b.34.13.1	37461
1hpwA	129	84.28	d.24.1.1	61118
1mbmA	198	84.46	b.47.1.3	78916