# List of top-scoring protein chains for t06-w0.5-1-near-backbone-11-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1xyiA	66	2.236		
2ak3A	226	8.705	c.37.1.1,g.41.2.1	31892,45193
1c8cA	64	10.38	b.34.13.1	59084
2aukA	190	33.17		
2axpA	173	33.24	c.37.1.1	127497
2gysA	419	37.45	b.1.2.1,b.1.2.1,b.1.2.1,b.1.2.1	135865,135866,135867,135868
1xrsB	262	41.34	c.23.6.1,d.230.4.1	115884,115885
2bw2A	140	42.23		
1kagA	173	45.73	c.37.1.2	72249
2gk4A	232	46.41		
1ckeA	227	47.85	c.37.1.1	31846
2bvlA	543	53.91		
2f9hA	129	54.49	b.161.1.1	133162
2z1cA	75	56.94		
1dcjA	81	57.18	d.68.3.3	59115
1feuA	206	57.33	b.53.1.1	59801
1sg7A	96	58.30	a.239.1.1	118961
3bjkA	153	59.83		
3tmkA	216	60.00	c.37.1.1	31920
2csgA	424	62.90	b.82.2.12	130768
1yliA	153	64.22	d.38.1.1	123651
3bduA	62	64.39		
2gvhA	288	64.50	d.38.1.1,d.38.1.1	135776,135777
2ra2A	64	64.97		
1jlyA	304	69.13	b.42.3.1,b.42.3.1	25587,25588
1gd0A	122	69.35	d.80.1.3	39834
3c8xA	206	73.23		
1vkwA	218	73.35	d.90.1.2	108695
2os5A	119	73.51		
2glwA	92	78.07		
1eu8A	409	79.68	c.94.1.1	59502
2eisA	133	80.77		
2pv4A	145	80.93		
2hd9A	145	85.93		
2qrwA	128	86.95		
1r0uA	148	89.74	b.60.1.5	96741