Best Alignments for T0467

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1bnzA/T0467-1bnzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1bnzA/T0467-1bnzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.9239e-017.32e-09 1azpA b.34.13.1
2fxqA/T0467-2fxqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fxqA/T0467-2fxqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4027e+007.44e-10
1xyiA/T0467-1xyiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xyiA/T0467-1xyiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5928e+003.57e-09
2ra2A/T0467-2ra2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ra2A/T0467-2ra2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5942e+009.78e-06
2rb6A/T0467-2rb6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2rb6A/T0467-2rb6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.3008e+001.94e-04
2prdA/T0467-2prdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2prdA/T0467-2prdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.0080e+009.52e-09 b.40.5.1
1lqyA/T0467-1lqyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1lqyA/T0467-1lqyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.2873e+002.06e-05 d.167.1.1
1se8A/T0467-1se8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1se8A/T0467-1se8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.5183e+001.22e-09 b.40.4.3
2gfaA/T0467-2gfaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gfaA/T0467-2gfaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.6494e+002.40e-09 b.34.9.1
b.34.9.1
2z1cA/T0467-2z1cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2z1cA/T0467-2z1cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.8073e+005.96e-07

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001