Best Alignments for T0467

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1c8cA/T0467-1c8cA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1c8cA/T0467-1c8cA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8323e-015.70e-09 1azpA b.34.13.1
2fxqA/T0467-2fxqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fxqA/T0467-2fxqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.2388e-017.73e-12
1xyiA/T0467-1xyiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xyiA/T0467-1xyiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.5441e-019.81e-11
2q8oA/T0467-2q8oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2q8oA/T0467-2q8oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6506e+001.30e-06
2z1cA/T0467-2z1cA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2z1cA/T0467-2z1cA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1344e+002.84e-08
2gfaA/T0467-2gfaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gfaA/T0467-2gfaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2560e+001.36e-12 b.34.9.1
b.34.9.1
2qqrA/T0467-2qqrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2qqrA/T0467-2qqrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6271e+001.60e-11
1vcbB/T0467-1vcbB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vcbB/T0467-1vcbB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4900e+003.44e+01 1vcbB d.42.1.1
2e2dC/T0467-2e2dC-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2e2dC/T0467-2e2dC-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.6657e+001.33e-12 b.40.3.1
1i40A/T0467-1i40A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1i40A/T0467-1i40A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.5094e+005.56e-07 b.40.5.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001