Best Alignments for T0467

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1bf4A	8.5097e+00	1bf4A/T0467-1bf4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.13.1
1bnzA	1.1776e+01	1bnzA/T0467-1bnzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.13.1
1xyiA	1.3302e+01	1xyiA/T0467-1xyiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1azpA	1.4157e+01	1azpA/T0467-1azpA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.13.1
1c8cA	1.4934e+01	1c8cA/T0467-1c8cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.13.1
3bduA	2.3040e+01	3bduA/T0467-3bduA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1yliA	2.3941e+01	1yliA/T0467-1yliA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.38.1.1
2eisA	2.5662e+01	2eisA/T0467-2eisA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2rb6A	2.5909e+01	2rb6A/T0467-2rb6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1bbxC	2.6246e+01	1bbxC/T0467-1bbxC-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.13.1
1bb8	2.7545e+01	1bb8/T0467-1bb8-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1v3yA	2.8711e+01	1v3yA/T0467-1v3yA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.167.1.1
2q2bA	3.2622e+01	2q2bA/T0467-2q2bA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ifrA	3.9149e+01	1ifrA/T0467-1ifrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.16.1
3bjkA	3.9507e+01	3bjkA/T0467-3bjkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2v1oA	4.0813e+01	2v1oA/T0467-2v1oA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1adwA	4.2818e+01	1adwA/T0467-1adwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.6.1.1
2pth	4.3085e+01	2pth/T0467-2pth-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1pfoA	4.4227e+01	1pfoA/T0467-1pfoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	f.9.1.1
1je3A	4.5117e+01	1je3A/T0467-1je3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.68.3.3

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001