(c) 1992-2000 Regents of the University of California, Santa Cruz
Sequence Alignment and Modeling Software System
http://www.cse.ucsc.edu/research/compbio/sam.html

Citations (SAM, SAM-T99, HMMs)

Sequence numbers correspond to the following labels:

    • T0467 BcR97A, Bacillus cereus, 97 residues
              10        20                   30         40        50   
              |         |                    |          |         |   
   1 MDLNRMGKDEYYVQITVDGKE..VHS...KAD..N....GQ.KYKDYEYKLTGFDKDGKEKELEF
   2 CDLNRMGKDEYYVQITVDGKE..VHS...KAD..N....GQ.KYKDYEYKLTGFDKDGKEKELEF
   3 CDLNRMGKDEYYVQITVDGKE..FDS...KAS..N....GQ.KFKDYEYKLTGFDKDGKEKELEF
   4 CDLNRMGKDEYYVQITVDGKE..FDS...KAS..D....GQ.KFKDYEYKLTGFDKDGKEKELEF
   5 CDLNRMGKDEYYVQITVDGKE..FDS...KAS..D....GQ.KFKDYEYKLTGFDKDGKEKELEF
   6 CDLNRMGKDEYYVQITVDGKE..YNG...KSD..N....GE.PYKDYQYKLTGFDKEGKEKELEF
   7 CDLNRMGKDTYYVQITVDGKV..YEG...KAD..D....GT.RYTDYQYKLAGFDEEGKEKTMEF
   8 CDINRMGKDEYYVQITADGIE..KNE...KSD..N....GE.PYKYFEYKLKGFDKDGKEKELEF
   9 CDLNRMGKDEYYVQITVDGKE..YNG...KSN..D....GA.PYKDYQYKLTGFDKEGKEKELEF
  10 CDLNRMGKDEYYVQITVDGKE..VHS...KAD..N....GQ.KFKDYEYKLTGFDKDGKEKELEF
  11 CDINRMGKDEYYVQITVDGKE..YHG...KSD..N....GE.PYKDYQYKLTGFDKDGKEKELEF
  12 CDINRMGKDEYYVQITVDGKE..TYS...KAD..N....GE.KFKDYEYKLTGFDKDGKEKELEF
  13 CDINRMGKDEYYVQITVDGKE..TYS...KAD..N....GE.KFKDYEYKLTGFDKDGKEKELEF
  14 CDLNRMGKDEYYVQITVDGKE..YNG...KSD..N....GE.PYKHFEYKLKGFDKDGKEKELEF
  15 CDLNRMGKDEYYVQITVDGKE..YNG...KSD..N....GE.PYKHFEYKLKGFDKDGKEKELEF
  16 CDLNRMGKDEYYVQITVDGKE..YNG...KSD..N....GE.PYKHFEYKLKGFDKDGKEKELEF
  17 CDINRMGKDQYYVQITADGIE..KNE...KSH..S....GE.PYKYFEYKLKGFDKDGKEKELEF
  18 -GVYYFKNANHIGADISYVKI..TTD...GEK..G....KN.VSFNYSYTMPAYDEAGKETEVTF
  19 -GVYYFKNANHIGADVSYVKI..TTD...GEK..G....KN.VSFNYSYTMPAYDEAGKETEVTF
  20 -GVYYFKNANHIGADVSYIKI..TTD...GEK..G....KN.VSFNYSYTMPAYDEAGKETEVTF
  21 -GVYYFKNANHIGADVSYIKI..TTD...GEK..G....KN.VSFNYSYTMPAYDEAGKETEVTF
  22 -GVYYFKNANHIGADVSYVKI..TTD...GEK..G....KN.VSFNYSYTMPAYDEAGKETEVTF
  23 --KVSYGGGTYYVQITKDGKE..KEV...SDN..S....GK.KFKEYDYDIKSYQKDGKEKRVTF
  24 ---YYFKNANKIGADTSYVKI..TKD...PTK..G....KE.ISFNYNYTLPSYDEDGKETEVTF
  25 CNLNRLGTDTYYVQITKDGEK..LKE...K--..N....VN.GDTTYDYKLPGFDKDGKEKEMEF
  26 CNLNRVGTDEYYVHITGNGEE..DTS...KFD..D....GE.EYSVFKYELAGFDEDGQEKTMEF
  27 CNINRIGKDNVYVEVIDYVDT..QET...KLD..S....GE.IMTRYIYNQKAFDEEGKSVEVEF
  28 ---YYFKNANKIGADASYVKI..TKD...PTK..S....NE.ISFNNNYTLPAYDENGKETEVTF
  29 ---YYFKNANKIGADASYVKI..TKD...PTK..G....KE.ISFNNNYTLPAYDENGKETEVTF
  30 --KVSYGGGTYYVQITKDGKE..QQD...T-A..N....GQ.KYTRYSYQMNSYKKDGKEKKVEF
  31 --KINYGGTNYYVQIHNDGKK..LEE...KTQ..S....GS.VWHGYGYKEKAYNNAGQEKTLDF
  32 ---VVMGGEEYYVQITTDGTK..TVS...KSD..S....GQ.ETVNYRYILPGYTKEGKEKELDF
  33 -----------MGSEQLYVKI..TKD...GVQ..G....KD.VGFNYSYTLPAYNEDGKEKEVTF
  34 -DFNRLNKDTYYVHITADGEV..EEY...KAS..N....GE.IFKMYWYELPAYNKNGKEKTLKF
  35 ---ISYGGTSCYVQINNDGKK..TIE...KGH..E....NN.VWHGFSYKEKVHEKSGKEKVLEF
  36 ---------------------..---...DEK..G....KN.VSFNYSYTMPAYDEAGKETEVTF
  37 ---ISYAGTSCYVQINNDGKK..TIE...KVH..E....NN.VWHGFSYKEKVHEKSGKEKVLEF
  38 -DFNRVGKDHAYTLITENGDT..EET...VTG..S....GE.VFTRYHYSQSAFTDEGEEITVSF
  39 ---YYYGGEAYYTQITTSGEK..KDE...KTN..S....GE.AMTIYYYQQPAFNKNGEEKTVEL
  40 --HYFYGGEAYYTKITTNGEM..SAT...QAD..N....GE.KFTTYTYKQAAYNKDGEKKQVTL
  41 --HNEVTDRFNPLVKKESVYV..QIN...KDG..K....HL.SPGRYEYTLEGYNDTGKEKEITF
  42 ---YYYGGETYYTQITTDGTK..QVD...KDT..E....GK.SYVSYQYDLPAYDQAGHQKKVSF
  43 -FHNDVTDRFNPFIHQQDVYV..QID...RDG..R....HL.SPGGTEYTLDGYNASGKKEEVTF
  44 ---MNYGGESYYVQILVNGER..EET...TAD..D....HT.PMVIYHYKLDSFNSKGDKKLVKF
  45 -FHNDVTDRFNPFIHQQDVYV..QID...RDG..K....HL.SPGGTEYTLDGYNASGKKEEVTF
  46 ---HGITDQFNPLVKEDDSYV..KTT...EVS..T....RM.DDQLRSYTQSAFNKEGKETQLMY
  47 ---HGITDQFNPLVKEDDSYV..KTT...EVS..T....RM.DDQLRSYSQSAFNKEGKETQLMY
  48 -DWNRIGKDTLFVKVEAVSDV..EET...TLE..N....GE.VMKRYVYTQPAFTSDGKSKEVTF
  49 ----PVIDKYNPFYKTKEYYT..VVN...TIG..Q....HV.GDEWYEYEFIAFDERGKEQKIKK
  50 --------DHINPFIPKEVVY..VQI...YED..P....AP.HGQRYKYTLTGYTEDGEEKEITF
  51 ---HGITDQFNPLVKKDDSYV..KTT...EVS..T....RM.DDQLRSYSQSVFNKEGKETQLMY
  52 ---HGITDQFNPLVKEDVSYV..KTT...EVS..T....RM.DDQLRSYSQSAFNKEGKETQLMY
  53 ----PVIDKYNPFYKTKEYYT..VVN...TIG..Q....HV.GDEWYEYEFIAFDERGKEQKIKK
  54 ----PVIDKYNPFYKTKEYYT..VVN...TIG..Q....HI.GDEWYEYEFIAFDERGREQKIKK
  55 ---TNYGGTTYYTKITNAGQQ..ATD...HDQ..D....GN.KYTIYAYDLPGYDEKGSLQQLKF
  56 ----PVIDKYNPFYKTKEYYT..VVN...TIG..Q....HV.GDEWYEYEFIAFDERGKEQKIKK
  57 ----PVIDKYNPFYKTKEYYT..VVN...TIG..Q....HI.GDEWYEYEFIAFDERGREQKIKK
  58 -----FLTTQTNTDYYTQIDN..RWV...TDI..A....PH.GAMNYKYTLVAYDESGNAKDVTF
  59 ----PVIDKYNPFYKTKEYYT..VVN...TIG..Q....HI.GDEWYEYEFIAFDERGREQKIKK
  60 ---------------------..---...---..-....--.---------PAYDEAGKETEVTF
  61 ----PIIDKYNPLYKTKEYYT..VVN...TIG..Q....HV.GDEWYEYEFIAFDERGKEQKIKK
  62 ----PVIDKYNPFYXTKEYYT..VVN...TIG..Q....HV.GDEWYEYEFIAFDERGKEQKIKK
  63 ----PVIDKYNPLYTTKEYYT..IVD...AIG..Q....HV.GDEWYEYEFIAFDERGREQKIKK
  64 -------------------YT..QIT...GSS..V....QG.QNGRYDYEVIAYDEKKKKEELSF
  65 ----GVLDQLNPLVKEGNVYV..KTK...KAD..S....VN.GYGIASYTQVAADEEGKTREITF
  66 -------------------YT..KIT...GPG..V....QG.QNGRYDYKVIAYDEKKKKEELSF
  67 ---GPVIDKYNPFYKTKEYYT..VVN...DIG..Q....HI.GDGWYEYEFIAYDEKGREKTIIK
  68 -YHSNYGTKTYYTQITTKGER..KTG...KDD..S....GK.PYVYYHYSQPGYSDNGVKKELTF
  69 --------KVNPFVAVTDVYV..EID...EDG..T....KN.ELGDYVYEIQGVDEQGQERTVEF
  70 ---HGITDQFNPLVKEDVSYV..KTT...EVS..T....RM.DDQLRSYSQSAFNKEGKETQLMY
  71 CDFNRMFKDQAYTQIKGEGKL..D--...---..-....-N.QHKQYEYTLPAYNEKGEEIQLTF
  72 --------------YYAVVDN..DGK...YGA..E....NK.GFARWEYKFKGYNESGQEQKIAM
  73 --------DKYYVQIK-----..---...-GE..G....EI.KDKTRVYTLPAYDEEGAEKKISF
  74 ----PVIDKYNPFYKTKEYYT..VVN...TIG..Q....HV.GDEWYEYEFIAFDERGKEQKIKK
  75 --FNRAFKDEAYTQIKGEGKL..D--...---..-....-N.QHKQYEYTLPAYNEKGEEIQLTF
  76 --------------KEDVYYA..VVD...SDG..EyevkSK.GFGRWSYKFKGYDESGKEQKIML
  77 -----------------DYYT..KIT...PLS..E....RK.EKNDYFYKVKAFDKNGNAIKLNF
  78 ----GILDQLNPLVEKGEVYV..KTQ...KPE..E....VN.EYGTARYVQKAADANGKERTVEF
  79 ----NYGTQDYYTQIVDKGTK..FVE...KDD..S....NR.SYVNYAYHQPAYNQASQKITVKF
  80 ---------------------..--E...VVD..K....EK.DFYIYHYNQTGYTKDGKSKKIEY
  81 ---NRIGKDVYYVQIKGAGDT..EKV...---..-....-E.GRNLRNYTLPAYDEDGVKKQITF
  82 -------STPYYTQITTTGKKfdVID...DET..G....AA.RDIDYPYTQMAYDEKGHGTEVDF
  83 --LNRIGKDVYYVQIKGEGTI..EKV...---..-....-E.GRNLRNYTLPAYDENGVKKQITF
  84 ---NRIGKDVYYMQIKGEGTI..EKV...DG-..-....--.-RNLRNYTLPAYDEDGVKKQITF
  85 --------EEYYVQIQGEGEI..KNN...K--..-....--.----RVYALPTYNKDGDEKKVTF
  86 ---------------IQDYYA..VID...KSE..K....--.KDDEYLYTFKGYTEDGKLQVIKR
  87 ---NRIGKDVYYMQIKGEGTI..EKV...DHR..-....--.--NLRNYTLSAYDEDGVKKQITF
  88 ---NRIGKDVYYMQIKGEGTI..EKV...DHR..-....--.--NLRNYTLSAFDEDGVKKQITF
  89 -------DRYNPLVKEDFVYV..KAK...ESGrlS....KI.GEVAGDYKLMGYYTSGEERDVKF
  90 ---------------------..---...---..-....--.-----------------------
  91 ---------------------..---...---..-....--.-GDEYLYTLKGYTEDGKQQMIKK
  92 ---------------------..---...---..-....--.KGNERVYTLLTYDKEGTEKKVTF
  93 -----YLTKQYYVKVTTDSKV..ENE...KLS..N....GE.VLTYHVYDEKVYDKKGEERELKI
  94 ------------------QAY..TQI...KGE..G....KL.VDGRYQYTLPSYNDEGKQITVTF
  95 ---------------------..---...---..-....--.------YTFKGYTEDGKLQVVKR
  96 ----RIGKDVYYVHVKGESVI..E--...---..K....VE.GRSLRNYTLPAYDEDGAKKQITF
  97 ---------------------..---...---..-....--.KGNERVYTLLTYDKEGTEKKVTF
  98 -------DRFNPLVKEKDVYV..HTEgkaKPD..P....EH.EGRRFYYVLNGVDESGNENTIKV
  99 ---NKIGKDVYYMQIKGEGAI..EKV...DG-..-....--.-RNLRNYTLPAYHEDGVKKQITF
 100 ---------------------..---...--T..G....GA.GEKEYTYRLTTYNDRGQTRIVMF
 101 ---------------------..-IG...HST..G....QM.GEDIYTYRMLTSDAQGKQRWLTF
 102 --------QMNPFLDIENHYA..IID...NDG..K....ELgGNKGREYTVKAYDKDGKEKEVTI
 103 ----------------QDYYA..VID...KGE..-....-K.KDGEYLYTFKGYTEDGKLQVVKR
 104 --------QMNPFLDIENHYA..IID...NDG..K....ELgGNKGREYTVKAYDKDGKEKEVTI
 105 ---------------------..---...---..-....--.--KGFEYTVKAYDEKGEEKEVTF
 106 ----------------QDYYA..VID...KGE..-....-K.KDGEYLYTFKGYTEDGKLQVVKR
 107 ----------------QDYYA..VID...KGE..-....-K.KDGEYLYTFKGYTEDGKLQVVKR
 108 -------------------YL..KAE...DHA..E....KP.DNGKYNYTLTGYDASGHKQQIEA
 109 ----------------QDYYA..VID...KGE..-....-K.KDGEYLYTFKGYTEDGKLQVIKR
 110 ----------------QDYYA..VID...KGE..-....-K.KDGEYLYTFKGYTEDGKLQVIKR
 111 ---------------------..---...---..-....--.--KGFEYTVKAYDEKGEEKEVTI
 112 ----------------QDYYA..VID...KGE..-....-K.KDGEYLYTFKGYTENGKLQIIKR
 113 ------------------YYA..VVD...KG-..-....EK.KDGEYLYTFKGYTEDGKLQVIKR
 114 ---------------------..---...---..-....--.-SSGYRYDLIGYDEDGKKRPLSI
 115 --------QMNPFLDIENHYA..IID...NDG..K....ELgGNKGREYTVKAYDKDGKEKEVTI
 116 ------------------YYA..VVD...KG-..-....EK.KDGEYLYTFKGYTEDGNQQIIKR
 117 ---------MNPFLKLEYRYA..VID...NDG..K....DLgGNKGRVYTVNTYDKDGNEKEITI
 118 ---------MNPFIDLENHYA..IID...NDG..K....ELgGNKGREYTVKAYDKDGKEKEVTI
 119 --------------------S..PIN...FPI..S....NT.LLISYEYKGIARDSSGKPRQMKF
 120 ---------MNPFLKLEYRYA..VID...NDG..K....DLgGNKGRAYTVNTYDKDGNEKEITI
 121 ---------MNPFLKLEYRYA..VID...NDG..K....DLgGNKGRVYTVNTYDKDGNEKEITI
 122 -------------IRETDYYV..QVSdplKKN..G....KN.QVGAYTYMTDGFDKDGVGHTVTF
 123 ---------MNPFLKLEYRYA..VID...NDG..K....DLgGNKGRAYTVNTYDKDGNKKEITI
 124 ---------------------..---...---..-....--.-----------------------
 125 ----QYGGDSYYMKIDTQPTV..SSV...EVP..V....GI.SIQGYTYQGTAKNAQGKTKSLKL
 126 --------------DIENHYA..IID...NDG..K....ELgGNKGREYTVKAYDKDGKEKEVTI
 127 -GVYYFKNANHIGADVSYIKI..TTD...GEK..G....KN.VSFNYSYTMPAYDEAGKKQEVTF
 128 ----YYSTEDYYVKITTDPKV..VKE...KAS..D....GY.TYINYNYDVTGYDKDGKSKNLKL
 129 ---------------------..---...---..-....-N.QFKGYEYTSKVYDDKGKQKEIKF
 130 ---------------------..---...---..-....--.-----------------------
 131 ---------------------..---...---..T....KN.QFKGYKYVSKVYDDKGKQKNITF
 132 ---------------------..---...---..-....-N.QFKGFKYVSNVYDDKGKQKQLTF
 133 ---------------------..---...---..-....KN.QFKGFKYISNVYDDKGKQKQLTF
 134 ---------------------..---...---..-....KN.QFKGFKYVSNVYDDKGKQKQLTF
 135 ---------------------..---...---..-....KN.QFKGFKYVSNVYDDKGKQKQLTF


                    60            70                            80     
                    |             |                             |     
   1 TA.....QK....NLRKEAFLRVYH....S.....D.K.....K.....G...VSA.WEEVKKDE
   2 TA.....QK....NLRKEAFLRVYH....S.....D.K.....K.....G...VSA.WEEVKKDE
   3 IA.....QK....NLRKEAFLRVYH....S.....D.K.....K.....G...VTA.WEEVKKDE
   4 IA.....QK....NLRKEAFLRVYH....S.....D.K.....K.....G...VTA.WEEVKKDE
   5 IA.....QK....NLRKEAFLRVYH....S.....D.K.....K.....G...VTA.WEEVKKDE
   6 MA.....QK....NLRKEAFLRVYH....S.....D.K.....K.....G...VSA.WEEVKKDE
   7 TA.....QK....NLRKEAFLRIYY....S.....D.K.....K.....G...VTA.WEEVQKDE
   8 TA.....QK....NLRKDAFLRVYH....S.....D.K.....K.....G...VTA.WEEVKKDE
   9 TA.....QK....NLRKEAFLRVFH....S.....D.K.....K.....G...VTA.WEEVKKDE
  10 TA.....QK....NLRKDAFLRVYH....S.....D.K.....K.....G...VTA.WEEVKKDE
  11 TA.....QK....NLRKEAFLRVYH....S.....D.K.....K.....G...VTA.WEEVKKDE
  12 TA.....QK....NLRKEAFLRVYN....S.....D.K.....K.....G...VTA.WEEVKKDE
  13 TA.....QK....NLRKEAFLRVYN....S.....D.K.....K.....G...VTA.WEEVKKDE
  14 NA.....QK....NLRKEAFLRVYN....S.....D.K.....K.....G...VTA.WEEVKKDE
  15 NA.....QK....NLRKEAFLRVYH....S.....D.K.....K.....G...VSA.WEEVKKDE
  16 NA.....QK....NLRKEAFLRVYN....S.....D.K.....K.....G...VTA.WEEVKKDE
  17 TA.....QK....NLRKDAFLRVYH....S.....D.K.....K.....G...VSA.WEEVKKDE
  18 SA.....DK....NLRKGAYLKLYI....K.....E.D.....K.....G...VTS.YEEVPEKE
  19 SA.....DK....NLRKGAYLKLYI....K.....E.D.....K.....G...VTS.YEEVPEKE
  20 SA.....DK....NLRKGAYLKLYI....K.....E.D.....K.....G...VTS.YEEVPEKE
  21 SA.....DK....NLRKGAYLKLYI....K.....E.D.....K.....G...VTS.YEEVPEKE
  22 SA.....DK....NLRKGAYLKLYI....K.....E.D.....K.....G...VTS.YEEVPEKE
  23 MA.....DH....NLRKEAYLKLTV....N.....S.V.....K.....G...VTS.WEEVKKSE
  24 SA.....DK....ELRKDAYLKLYI....K.....E.D.....K.....G...VTS.FEEVPEKE
  25 TA.....LK....NLRKEAFLRIYY....S.....E.K.....K.....G...VKS.WEEVKKDE
  26 TA.....DK....NLRIGAFLRLFY....S.....E.N.....K.....G...VKS.WEEVDKDD
  27 SA.....GK....ILRQEGYLMLYV....K.....N.G.....N.....E...VTS.YEEVEWNE
  28 SA.....DK....ELRKGAYLKLYI....K.....E.D.....K.....G...VTS.FEEVPEKE
  29 SA.....DK....ELRKGAYLKLYI....K.....E.D.....K.....G...VTS.FEEVPEKE
  30 TA.....DH....NLRKEAYLELTV....N.....S.V.....K.....G...VTS.WEEVKKAE
  31 TA.....TH....NLRHEAYLKLTY....N.....K.Q.....K.....G...VTN.WEEVKKTA
  32 KGql...TR....PLRKGAYLKITW....N.....K.N.....K.....G...VTS.YEEVEKKD
  33 TA.....DK....NLRKGAYLKLYY....K.....K.S.....K.....G...VTT.FEEVSSKN
  34 SA.....HK....NLRHDAYLKLYV....K.....K.E.....T.....E...VTS.YDEVKFHE
  35 TS.....TH....NLRKQAYLKLTY....N.....K.G.....K.....G...VTN.WEEIKKSE
  36 SA.....DK....NLRKGAYLKLYI....K.....E.D.....K.....G...VTS.YEEVPEKE
  37 TS.....TH....NLRKQAYLKLTY....N.....K.G.....K.....G...VTN.WEEIKKSE
  38 SS.....HK....NLRHGAYLRLYM....N.....H.-.....T.....D...VTS.YDEVQTED
  39 NEsr...DQ....PLRMKAYLKLKV....N.....P.R.....K.....G...VIS.WNEVTEKE
  40 REer...EH....PLKMNAYLKLKV....N.....P.R.....K.....G...VLS.WEEIKASE
  41 SA.....SD....SLRRNAYLKVNA....K.....G.-.....K.....Y...VET.WEEVQPGG
  42 NSak...SS....RLQKQAYLELKV....N.....D.R.....K.....G...VMS.WQKVDKAD
  43 FA.....GK....ELRKNAYLKVKA....K.....G.-.....K.....Y...VET.WEEVKFED
  44 MA.....SH....NLRNQAYLELTY....N.....K.H.....K.....G...VTN.WNEVQEKE
  45 YA.....AK....DLRKNAYLKVKA....K.....G.-.....K.....Y...VET.WEEVRFED
  46 TA.....TF....DVKPHRYLKITH....K.....G.-.....H.....H...VET.FEEVEKEE
  47 TA.....TF....DVKPHRYLKITH....K.....G.-.....H.....H...VET.FEEVEKEE
  48 TA.....AN....KLREGAYLRLYV....K.....D.G.....D.....T...VTS.YEEVSRAD
  49 TV.....KH....MLKRDEMLKVYA....K.....G.R.....Y.....G...-ES.IEEIEAAN
  50 TA.....GK....VLKEKAILKVNA....K.....G.-.....S.....F...VEK.WEEVQPEE
  51 TA.....TF....DVKPHRYLKITH....K.....G.-.....H.....H...VET.FEEVEKEE
  52 TA.....TF....DVKPHRYLKIAH....K.....G.-.....H.....H...VET.FEEVEKEE
  53 TV.....KH....MLKRDEMLKVYA....K.....G.R.....Y.....G...-ES.IEEIEAVN
  54 TV.....KH....MLKRDEALKVFA....K.....G.R.....Y.....G...-ES.IEEIEVAN
  55 NAnq...DR....PLKMNAYLKVIY....N.....D.K.....K.....G...VTD.WQRVPRAE
  56 TV.....KH....MLKRDEMLKVYA....K.....G.R.....Y.....G...-EL.IEEIEAVN
  57 TV.....KH....MLKRDEALKVFA....K.....G.R.....Y.....G...-ES.IEEIEVAN
  58 ET.....SK....VLTDGAYLCLKV....A.....P.I.....R.....G...VVT.WAEMQFDE
  59 TV.....KH....MLKRDETLKVYA....K.....G.R.....Y.....G...-ES.IEEIEAVN
  60 SA.....DK....NLRKGAYLKLYI....K.....E.D.....K.....G...VTS.YEEVPEKE
  61 TV.....KH....MLKRDEALKVYA....K.....G.R.....Y.....G...-EA.IEEIETVN
  62 TV.....KH....MLKRDEMLKVYA....K.....G.R.....Y.....G...-EL.IEEIEAVN
  63 TV.....KH....MLKRDEALKVYA....K.....G.R.....Y.....G...-EA.IEEIEAVN
  64 SA.....GK....KLREGAYIQLYY....T.....M.I.....R.....G...VTY.WEEVSFEE
  65 TA.....DH....ELKTDHYLKVSN....K.....G.-.....A.....H...INT.YEEVKQDQ
  66 SA.....GK....KLREGAYIQLYY....T.....M.I.....R.....G...VTY.WEEVSFEE
  67 KV.....NH....MLKRNEPLKIFA....K.....G.S.....Y.....G...-ES.IVEIEPQD
  68 DSvl...PR....SLKMHAYLKVGY....N.....D.K.....Rq....Q...VIN.WEKVNQKD
  69 KA.....NK....NLRKGAFLRLKT....K.....K.-.....A.....F...VDS.WEEVQLED
  70 TA.....TF....DVKPHRYLKITH....K.....G.-.....H.....H...VET.FEEVEKGQ
  71 SKfg...ED....QFKQGAYLRLYM....K.....D.K.....D.....GkkvVTS.YDEVKKEE
  72 TA.....SK....HLRIGAYLKIRS....K.....G.S.....Y.....G...-ME.WEEVQGDE
  73 TShkaenDK....KLKEDAFLRLYV....S.....E.D.....Ndksv.D...VKS.YEEVKKED
  74 TV.....KH....MLKRDEMLKVYA....K.....G.R.....Y.....G...-ES.IEEI----
  75 SKfg...ED....QFKQGAYLRLYM....K.....D.K.....D.....GkkvVTS.YDEVKKEE
  76 TT.....TK....HLRIGAYLKIKS....K.....R.T.....Y.....G...-MQ.WEEVQREE
  77 YGmd...GH....PIKKGAYLKITYgivsD.....G.S.....N.....D...VKR.WEEVNKSS
  78 NG.....LS....VLKENHYLKISN....K.....G.-.....A.....H...IET.YEEVPREK
  79 NGnl...ER....PLKLHAYLKIGY....Na....K.R.....N.....Q...VIS.WSKVDKKD
  80 TA.....SK....KLKQNHYLVVRE....K.....S.-.....H.....T...IQS.FEEVKKSK
  81 RStkkenDH....KLNEDAFLRLYV....D.....Q.D.....Dnn9siE...VTS.YEEIQKAD
  82 NGhk...SR....PLKMQAYLRLDY....S.....TrR.....N.....Q...VIS.WEAVPKEK
  83 RStkkenDH....KLNEDALLRLFV....N.....Q.D.....Dnn9siE...VKS.YEEIQKAD
  84 RStkkenDH....KLNKYAFLRLYV....D.....Q.D.....Dns9siE...VKS.YEEIQKAD
  85 ASqkpn.NE....KMKENAFLRLYI....K.....Q.Kde9pdT.....E...VKS.YEEVQKSD
  86 MV.....NR....ELHTGAFIKIYA....K.....G.M.....Q.....G...-KG.WAEISKES
  87 RStkkenNH....KLNEDAFLRLYV....D.....Q.D.....Dns9siE...VKS.YEEIQKTD
  88 RStkkenNH....KLNEDAFLRLYV....D.....Q.D.....Dns9siE...VKS.YEEIQKTD
  89 YA.....PR....GLREGAYVKVKT....K.....G.-.....E.....Y...IET.YQEVQPNE
  90 NG.....FK....ELRKEAFLRVFH....S.....D.K.....K.....G...VTA.WEEVKKDE
  91 MV.....NR....QLQEGTFIKIYA....K.....G.I.....Q.....G...-KG.WAEVPKES
  92 TSqkpn.NE....KLKENAFLRLYI....Kqe9diP.D.....T.....E...VKS.YEEIQKDD
  93 SL.....QN....ELEKNQYYLIDW....E.....D.R.....R.....G...IVSkIAKVNQAK
  94 GKpt...GE....KFKEDAYLRLYL....K.....S.K.....D.....GekvVTS.YEEVQKND
  95 MM.....NR....ELHTGAFIKIYA....K.....G.M.....Q.....G...-KG.WAEIPKES
  96 RStkkenDH....KLNENAFLSLYV....D.....Q.D.....Dkd9siE...VKS.YEEIQKAD
  97 TSqkpn.NE....KLKENAFLRLYI....Kqe9diP.D.....T.....E...VKS.YEEIQKDD
  98 GVn....GK....DEFPDNYLKVHV....K.....G.-.....K.....Y...VYK.YEEVQEEK
  99 RStkkenDH....KLNEDAFLRLYV....D.....Q.D.....Dns9siE...VKS.YEEIQKTD
 100 DA.....QW....RLKPQRFLKIKT....K.....G.-.....Q.....N...VES.WTATARQE
 101 TA.....DH....RLKQRHYLKIET....K.....G.-.....Q.....N...VNS.WEAVVTNQ
 102 DG.....VG....ELQKGSYWHVLT....R.....G.-.....K.....F...LHD.KVQVTIDK
 103 MM.....NR....ELHTGAFIKIYA....K.....G.M.....Q.....G...-KG.WAEIPKES
 104 DG.....VG....ELQKGSYWHVLT....R.....G.-.....K.....V...LHD.KVQVTIDK
 105 DG.....VD....KLQKGSYWHVIT....R.....G.-.....K.....F...LHD.KVEIEVDK
 106 MM.....NR....ELHTGAFIKIYA....K.....G.M.....Q.....G...-KG.WAEIPKES
 107 MM.....NR....ELHTGAFIKIYA....K.....G.M.....Q.....G...-KG.WAEIPKES
 108 EA.....DE....KLHPGAFIKVLA....Y.....G.T.....K.....A...-KS.LTEVHEEE
 109 MM.....NR....ELHTGAFIKIYA....K.....G.M.....Q.....G...-KG.WAEIPKES
 110 MM.....NR....ELHTGAFIKIYA....K.....G.M.....Q.....G...-KG.WAEIPKES
 111 DG.....VD....KLQKGSYWHVIT....R.....G.-.....K.....F...LHD.KVEIEVDK
 112 MM.....NR....ELHTGAFIKIYA....K.....G.M.....Q.....G...-KG.WAEIPKES
 113 MM.....NR....ELHTGAFIKIYA....K.....G.M.....Q.....G...-KG.WAEIPKES
 114 GT.....SG....LLPEGNYLRVFV....K.....E.Ed....A.....E...VTD.YEQVNVLD
 115 DG.....VG....ELQKGSYWHGLT....T.....G.-.....K.....V...LHD.KVQVTIDK
 116 MV.....NR....ELHAGAFIKIYA....K.....G.M.....Q.....G...-KG.WAEITKES
 117 DG.....VD....TLQKGSYWHVIT....R.....G.-.....K.....S...VHD.KVQIEEEI
 118 DG.....VG....ELQKGSYWHVLT....R.....G.-.....K.....V...LHD.KVQVTIDK
 119 NTiqik.GT....NLKSGEIIRLTY....N.....K.Y.....Y.....G...VVR.YKQISRKS
 120 DG.....VD....TLQKGSYWHVIT....R.....G.-.....K.....S...VHD.KVQIEEEI
 121 DG.....VD....TLQKGSYWHVIT....R.....G.-.....K.....S...VHD.KVQIEEEI
 122 NG.....MK....KLKKGAYLKVSL....F.....L.-.....G.....E...AKS.YNEISKDK
 123 DG.....VD....TLQKGSYWHVIT....R.....G.-.....K.....S...VHD.KVQIEEEI
 124 --.....--....------FLRVYH....L.....D.K.....K.....G...VTA.WEEVQEDE
 125 KT.....DEhdigPFKAGQIIKISV....N.....K.R.....Y.....G...IVG.YQRVTKKE
 126 GG.....VG....ELQKSSYWHVLT....R.....G.-.....K.....V...LHD.KVQVTIDK
 127 --.....--....------------....-.....-.-.....-.....-...---.--------
 128 SS.....QE....KMQKGQYYIIHW....E.....D.R.....R.....E...IIS.--------
 129 YS.....EK....ELTKNEQFKVMI....G.....E.N.....K.....M...VVN.YKKIK---
 130 -C.....RQ....NLRKGAYLKLYI....K.....E.D.....K.....G...VTS.YEEVP---
 131 YS.....EK....KLAKDDQFKVLI....G.....E.N.....K.....M...VVN.YKKIK---
 132 YS.....EK....ELTKNEQFKVLV....G.....E.N.....K.....M...VVN.YKKIQ---
 133 YS.....EK....ELTKNEQFKVLV....G.....E.N.....K.....M...VVN.YKKIK---
 134 YS.....EK....ELTKNEQFKVLV....G.....E.N.....K.....M...VVN.YKKIK---
 135 YS.....EK....ELTKNEQFKVLV....G.....E.N.....K.....M...VVN.YKKIK---


         90       
         |       
   1 LPAKVKEKLGVK
   2 LPAKVKEKLGVK
   3 LPAKVKEKLSVK
   4 LPAKVKEKLGVK
   5 LPAKVKEKLGVK
   6 LPAKVKEKLNVK
   7 LPAKVKEKLGVK
   8 LPAKVKEKLSVK
   9 LPAKVKEKLSVK
  10 LPAKVKEKLGA-
  11 LPAKVKEKLGA-
  12 LPAKVKEKLGA-
  13 LPAKVKEKLGA-
  14 LPAKVKEKLGX-
  15 LPAKVKEKLGA-
  16 LPAKVKEKLGA-
  17 LPAKVKEKLGA-
  18 VPSKAAEKL---
  19 VPSKAAEKL---
  20 VPSKAAEKL---
  21 VPSKAAEKL---
  22 VPSKAAEKL---
  23 VPKEALKKL---
  24 VPAKAAEKL---
  25 LPTKVKEKLKV-
  26 IPAKAKEQLGVK
  27 IPSKAQVEL---
  28 VPAKAAEKL---
  29 VPAKAAEKL---
  30 VPKEALKKI---
  31 IPKKALDK----
  32 VPKTALEKL---
  33 VPAKAAKKL---
  34 VPNKAQDQ----
  35 VPKKALD-----
  36 VPSKAAEKL---
  37 VPKKALD-----
  38 VPAQALETL---
  39 VPEKALEKL---
  40 VPKNAAEKI---
  41 MPSAVQKKL---
  42 LPKAAEKAL---
  43 MPDSVQSKL---
  44 IPKPALKEL---
  45 MPGSVQSKL---
  46 VPKKALDKL---
  47 VPKKALDKL---
  48 VPQSI-------
  49 IPINAKSKL---
  50 LPEKVRGKM---
  51 VPKKALDKL---
  52 VPKKALAKL---
  53 IPINAKSKL---
  54 IPINAKSKL---
  55 VPKAALAKL---
  56 IPINAKSKL---
  57 IPINAKSKL---
  58 LPSSVQEK----
  59 IPINAKSKL---
  60 VPSKAAEKL---
  61 IPINAKSKL---
  62 IPINAKSXL---
  63 IPINAKSKL---
  64 MPKAVQQ-----
  65 VPEKALQ-----
  66 LPEAVQQ-----
  67 IPVQARTKL---
  68 IPQAALN-----
  69 IPAEI-------
  70 VPKKS-------
  71 LPDKVKEKLQ--
  72 IPAKVKEKVTI-
  73 LPEKVKKKLNVK
  74 ------------
  75 LQTKVKEKLQ--
  76 IPAKAKEKVTI-
  77 IPEKALGKI---
  78 VPEKA-------
  79 VPKAALKQ----
  80 IPTKAKEK----
  81 LPEKVKDKFTI-
  82 VPKAALAKL---
  83 LPEKIKEKFT--
  84 LPEKVKDKFTI-
  85 LPAKTKEKLGVK
  86 IPQKALQKI---
  87 LPKKVKDKFTI-
  88 LPKKVKDKFTI-
  89 IPKEIKEKL---
  90 LPGKVKEKLDVK
  91 IPPKALQKI---
  92 LPAKTKEQLGVK
  93 IDKGILDKLN--
  94 LPTKVKEKLQ--
  95 IPQKALEKI---
  96 LPEKVKKKFNV-
  97 LPAKTKEQLGVK
  98 VPEKAKEKL---
  99 LPKKVKDKFTI-
 100 VPSGVRQNL---
 101 VPQNIQE-----
 102 IPDGAKAKL---
 103 IPQKALEKI---
 104 IPDGAKAKL---
 105 IPDGAKAKL---
 106 IPQKALEKI---
 107 IPQKALEKI---
 108 IPEGALA-----
 109 IPQKALEKI---
 110 IPQKALEKI---
 111 IPDGAKAKL---
 112 IPQKALEKI---
 113 IPQKALEKI---
 114 VPEQLKE-----
 115 IPDGAKAKL---
 116 IPQKALQKI---
 117 IPDGAKAKL---
 118 ISDSAKAKL---
 119 VPKKA-------
 120 IPDGAKVKL---
 121 IPDGAKAKL---
 122 VPHKPLKKLE--
 123 IPDGAKVKL---
 124 LPKKVKKKLGVK
 125 TPL---------
 126 ISDSAKAKL---
 127 ------------
 128 ------------
 129 ------------
 130 ------------
 131 ------------
 132 ------------
 133 ------------
 134 ------------
 135 ------------