# List of top-scoring protein chains for t2k-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1zckA	154	15.63		
2obaA	138	17.86		
1x3zB	72	26.50	a.189.1.1	121674
1fs1B	141	32.59	a.157.1.1,d.42.1.1	19252,38664
1f5jA	199	33.29	b.29.1.11	24342
1n2eA	300	35.61	c.26.1.4	85268
1y13A	181	36.40	d.96.1.2	116319
2nqtA	352	36.65		
2a84A	300	37.37	c.26.1.4	126389
2jwiA	143	38.83		
2jzfA	143	41.37		
1t01A	255	48.34	a.24.9.1,a.24.9.1	106188,106189
2hcrA	326	49.50		
1h4gA	207	50.02	b.29.1.11	70863
2dt9A	167	50.22		
1fqvD	149	53.82	a.157.1.1,d.42.1.1	19263,38667
1w6vA	141	53.82	d.324.1.1	120674
1id3B	102	58.92	a.22.1.1	66113
2jzdA	129	61.76		
1v9dA	340	61.90	a.207.1.1	100535
1aoiB	87	66.09	a.22.1.1	16470
2gufA	594	70.96	f.4.3.3	135736
2odtX	328	79.58		
2gar	212	79.84		
2dj6A	115	80.42		
1u7pA	164	82.78	c.108.1.17	113095
1a66A	178	84.13	b.2.5.3	22441
1dp4A	435	88.40	c.93.1.1	35710