# List of top-scoring protein chains for t06-w0.5-1-n_sep-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2g64A	140	8.565	d.96.1.2	134694
1h3gA	601	22.69	b.1.18.2,b.71.1.1,c.1.8.1	90594,90595,90596
2ictA	94	26.24		
1tcvA	287	32.47		
2qguA	211	33.68		
1f5jA	199	37.99	b.29.1.11	24342
1h4gA	207	40.48	b.29.1.11	70863
2e67A	264	44.57		
1utyA	187	49.71	b.147.1.1	108036
2bmbA	545	56.25		
3cecA	104	57.21		
1v9tA	166	65.88	b.62.1.1	108451
2nn8A	138	66.11	b.29.1.3	138392
2a4vA	159	68.03	c.47.1.10	126163
1vkrA	125	73.85	c.44.2.1	108689
2ftsA	419	74.63	b.85.6.1,b.103.1.1,c.57.1.2	134079,134080,134081
1v5xA	203	79.45	c.1.2.4	100377
2qiwA	255	79.93		
1b66A	140	82.28	d.96.1.2	40657
2dj6A	115	82.29		
1j77A	209	85.45	a.132.1.2	62674
1j0hA	588	88.33	b.1.18.2,b.71.1.1,c.1.8.1	77027,77028,77029