# List of top-scoring protein chains for t06-w0.5-1-n_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2g64A	140	5.112	d.96.1.2	134694
2qguA	211	17.85		
1h4gA	207	20.68	b.29.1.11	70863
1f5jA	199	22.27	b.29.1.11	24342
2ictA	94	23.81		
1h3gA	601	27.86	b.1.18.2,b.71.1.1,c.1.8.1	90594,90595,90596
1v9tA	166	37.77	b.62.1.1	108451
2cwzA	141	43.96	d.38.1.7	130961
1utyA	187	46.00	b.147.1.1	108036
2e67A	264	47.49		
2pt0A	340	54.87		
2nn8A	138	56.26	b.29.1.3	138392
1tcvA	287	56.45		
2dj6A	115	57.88		
3cecA	104	57.94		
2bmbA	545	58.33		
1lopA	164	61.16	b.62.1.1	27510
1b66A	140	61.95	d.96.1.2	40657
2vkjA	106	69.43		
1v5xA	203	74.38	c.1.2.4	100377
2a4vA	159	76.94	c.47.1.10	126163
2qiwA	255	81.49		
1vkrA	125	88.62	c.44.2.1	108689
1q5yA	85	88.63	d.58.18.4	95950