# List of top-scoring protein chains for t04-w0.5-1-n_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1bplB	294	15.38	b.71.1.1	27716
1u0jA	267	18.19	c.37.1.20	107546
2g64A	140	25.21	d.96.1.2	134694
1f5jA	199	30.33	b.29.1.11	24342
1x3zB	72	31.95	a.189.1.1	121674
2ictA	94	35.35		
2c3gA	98	54.95		
2e67A	264	65.16		
1pvxA	194	65.42	b.29.1.11	24341
1h1aA	191	67.52	b.29.1.11	83450
1nwwA	149	69.51	d.17.4.8	86306
1b66A	140	74.16	d.96.1.2	40657
3cecA	104	76.23		
1h4gA	207	77.87	b.29.1.11	70863
1meoA	209	79.49	c.65.1.1	79035
1dvjA	246	80.22	c.1.2.3	28546
2g17A	337	85.67	c.2.1.3,d.81.1.1	134512,134513
1t01A	255	89.08	a.24.9.1,a.24.9.1	106188,106189