Best Alignments for T0459

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2hztA/T0459-2hztA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2hztA/T0459-2hztA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5593e-156.50e-50
2fswA/T0459-2fswA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fswA/T0459-2fswA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0861e-158.81e-49 a.4.5.69
1ub9A/T0459-1ub9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ub9A/T0459-1ub9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.3412e-072.90e-23 a.4.5.28
3bpvA/T0459-3bpvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3bpvA/T0459-3bpvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6720e-061.38e-25
3bj6A/T0459-3bj6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3bj6A/T0459-3bj6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9652e-055.12e-23
1r1tA/T0459-1r1tA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1r1tA/T0459-1r1tA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4126e-052.04e-23 a.4.5.5
2pexA/T0459-2pexA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2pexA/T0459-2pexA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9572e-054.25e-21
3cjnA/T0459-3cjnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3cjnA/T0459-3cjnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.3990e-053.25e-24
3cdhA/T0459-3cdhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3cdhA/T0459-3cdhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.5558e-054.14e-25
2gxgA/T0459-2gxgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gxgA/T0459-2gxgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.7314e-054.74e-25

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001