Best Alignments for T0459

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2hztA/T0459-2hztA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2hztA/T0459-2hztA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1116e-161.45e-50
1z7uA/T0459-1z7uA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z7uA/T0459-1z7uA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7018e-151.17e-44 a.4.5.69
1ub9A/T0459-1ub9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ub9A/T0459-1ub9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.2502e-069.49e-19 a.4.5.28
3bpvA/T0459-3bpvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3bpvA/T0459-3bpvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.9671e-064.25e-23
1r1tA/T0459-1r1tA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1r1tA/T0459-1r1tA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.6423e-062.95e-21 a.4.5.5
2gxgA/T0459-2gxgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gxgA/T0459-2gxgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.5946e-052.07e-21
3bj6A/T0459-3bj6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3bj6A/T0459-3bj6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.3130e-052.29e-19
2pexA/T0459-2pexA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2pexA/T0459-2pexA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.6098e-052.13e-18
2oqgA/T0459-2oqgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2oqgA/T0459-2oqgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.6231e-051.51e-16
3cjnA/T0459-3cjnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3cjnA/T0459-3cjnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.6090e-052.67e-19

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001