# List of top-scoring protein chains for T0457.t2k-w0.5 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2hawA	309	2.76e-10	c.107.1.1	136299
1i74A	309	3.13e-10	c.107.1.1	61867
1wpnA	188	4.47e-10	c.107.1.1	114826
2enxA	310	9.91e-10		
2eb0A	307	1.16e-09		
2iw4A	309	1.36e-09		
1wppA	311	2.11e-09	c.107.1.1	114828
1k20A	310	3.51e-09	c.107.1.1	68027
1ir6A	424	8.83e-05	c.107.1.2	71342
2qb7A	397	0.09872		
1wzaA	488	3.445	b.71.1.1,c.1.8.1	121489,121490
2b3rA	134	19.81		
1tedA	393	28.69	c.95.1.2	106807
1teeA	393	29.05	c.95.1.2	106811
2qsfX	171	30.71		
1h4pA	408	39.51	c.1.8.3	90617
2v0cA	878	46.04		
1h3nA	878	48.33	a.27.1.1,b.51.1.1,c.26.1.1	76641,76642,76643
1fobA	334	49.48	c.1.8.3	83255
2gtlO	215	50.35	b.61.7.1,g.12.1.1,h.1.32.1	135673,135674,135675
1wm0X	292	52.81	a.123.1.1	109404
2imjA	166	54.98		
1e27A	276	55.30	b.1.1.2,d.19.1.1	20763,38271
1gz1A	362	58.61	c.6.1.1	76405
1ocjA	362	58.68	c.6.1.1	86801
1fpzA	212	62.84	c.45.1.1	59976
1bvwA	360	65.04	c.6.1.1	30668
2bvwA	362	65.30	c.6.1.1	30666
1oc7A	364	66.49	c.6.1.1	86794
1i58A	189	71.10	d.122.1.3	61773
1i5dA	191	71.64	d.122.1.3	61783
1m4rA	151	74.65	a.26.1.3	84799
1o1xA	155	77.73	c.121.1.1	86553
2e85A	159	79.32		
2i8lA	156	79.89