Best Alignments for T0454

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template Template E-value A2M alignment SCOP Domain(s)
2uxuA 1.0176e-25 2uxuA/T0454-2uxuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bhqA 4.7882e-25 3bhqA/T0454-3bhqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2f07A 5.3234e-25 2f07A/T0454-2f07A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bcgA 8.4292e-25 3bcgA/T0454-3bcgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ibdA 1.6271e-24 2ibdA/T0454-2ibdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2hyjA 3.3987e-24 2hyjA/T0454-2hyjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qcoA 3.6838e-24 2qcoA/T0454-2qcoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3c2bA 3.9984e-24 3c2bA/T0454-3c2bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qvtA 5.8463e-24 1qvtA/T0454-1qvtA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m a.4.1.9
a.121.1.1
1rktA 8.4739e-24 1rktA/T0454-1rktA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m a.4.1.9
a.121.1.1
3bruA 9.6200e-24 3bruA/T0454-3bruA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2genA 1.0132e-23 2genA/T0454-2genA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m a.4.1.9
a.121.1.1
3crjA 1.0611e-23 3crjA/T0454-3crjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3cdlA 1.2392e-23 3cdlA/T0454-3cdlA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2id6A 1.4840e-23 2id6A/T0454-2id6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2zb9A 1.4926e-23 2zb9A/T0454-2zb9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pbxA 1.5263e-23 2pbxA/T0454-2pbxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2g3bA 1.5341e-23 2g3bA/T0454-2g3bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m a.4.1.9
a.121.1.1
2rasA 1.6459e-23 2rasA/T0454-2rasA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3cwrA 2.0591e-23 3cwrA/T0454-3cwrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001