Best Alignments for T0454

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2uxuA	1.2436e-26	2uxuA/T0454-2uxuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2f07A	7.7517e-26	2f07A/T0454-2f07A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ibdA	1.7542e-25	2ibdA/T0454-2ibdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3c2bA	1.0041e-24	3c2bA/T0454-3c2bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2d6yA	2.3260e-24	2d6yA/T0454-2d6yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.1.9 a.121.1.1
1t56A	4.0857e-24	1t56A/T0454-1t56A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.1.9 a.121.1.1
3bhqA	4.3542e-24	3bhqA/T0454-3bhqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2g3bA	5.3170e-24	2g3bA/T0454-2g3bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.1.9 a.121.1.1
1vi0A	5.8201e-24	1vi0A/T0454-1vi0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.1.9 a.121.1.1
2genA	6.1756e-24	2genA/T0454-2genA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.1.9 a.121.1.1
1qvtA	9.8583e-24	1qvtA/T0454-1qvtA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.1.9 a.121.1.1
1z77A	1.0098e-23	1z77A/T0454-1z77A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.1.9 a.121.1.1
1rktA	1.0474e-23	1rktA/T0454-1rktA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.1.9 a.121.1.1
3cdlA	1.2318e-23	3cdlA/T0454-3cdlA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qcoA	1.2517e-23	2qcoA/T0454-2qcoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bcgA	1.5155e-23	3bcgA/T0454-3bcgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2g7sA	2.6055e-23	2g7sA/T0454-2g7sA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.1.9 a.121.1.1
2iu5A	2.7770e-23	2iu5A/T0454-2iu5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1jt6A	2.9159e-23	1jt6A/T0454-1jt6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.1.9 a.121.1.1
2hkuA	3.5695e-23	2hkuA/T0454-2hkuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001