Best Alignments for T0454

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
3bruA/T0454-3bruA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3bruA/T0454-3bruA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4060e-164.50e-73
1vi0A/T0454-1vi0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vi0A/T0454-1vi0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3069e-153.42e-73 a.4.1.9
a.121.1.1
3cdlA/T0454-3cdlA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3cdlA/T0454-3cdlA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1683e-152.17e-71
3bcgA/T0454-3bcgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3bcgA/T0454-3bcgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.4323e-151.86e-67
2uxuA/T0454-2uxuA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2uxuA/T0454-2uxuA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.3477e-151.74e-67
2id6A/T0454-2id6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2id6A/T0454-2id6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.3933e-157.03e-62
2iekA/T0454-2iekA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2iekA/T0454-2iekA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0143e-142.28e-66
3bhqA/T0454-3bhqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3bhqA/T0454-3bhqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1110e-141.45e-67
2hyjA/T0454-2hyjA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2hyjA/T0454-2hyjA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3158e-148.09e-61
2f07A/T0454-2f07A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f07A/T0454-2f07A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3065e-148.06e-60

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001