Best Alignments for T0454

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
3bcgA/T0454-3bcgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3bcgA/T0454-3bcgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4032e-162.54e-68
2ibdA/T0454-2ibdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ibdA/T0454-2ibdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.1978e-162.38e-81
3bhqA/T0454-3bhqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3bhqA/T0454-3bhqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.8254e-161.62e-65
3cdlA/T0454-3cdlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3cdlA/T0454-3cdlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.2011e-162.21e-75
1pb6A/T0454-1pb6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pb6A/T0454-1pb6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.7791e-162.58e-80 a.4.1.9
a.121.1.1
2uxuA/T0454-2uxuA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2uxuA/T0454-2uxuA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2962e-151.69e-75
3bruA/T0454-3bruA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3bruA/T0454-3bruA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4265e-151.70e-68
2f07A/T0454-2f07A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f07A/T0454-2f07A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.3664e-142.64e-63
2hytA/T0454-2hytA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2hytA/T0454-2hytA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.1299e-144.34e-60
3ccyA/T0454-3ccyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3ccyA/T0454-3ccyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4650e-142.71e-66

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001