PFRMAT SS
TARGET T0454
AUTHOR SAM-T02-server
METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    7 (1 EBGHSTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0454.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 1474
METHOD
MODEL 1
M C 0.999
T C 0.936
R C 0.303
A H 0.645
D H 0.745
C H 0.860
R H 0.973
S H 0.989
R H 0.989
L H 0.993
M H 0.997
E H 0.996
V H 0.995
A H 0.996
T H 0.994
E H 0.992
L H 0.992
F H 0.991
A H 0.969
Q H 0.790
K T 0.732
G T 0.738
F C 0.799
Y C 0.320
G C 0.250
V E 0.406
S C 0.522
I H 0.992
R H 0.996
E H 0.997
L H 0.998
A H 0.995
Q H 0.966
A H 0.873
A T 0.620
G T 0.895
A C 0.914
S C 0.919
I H 0.562
S H 0.700
M H 0.699
I H 0.789
S H 0.658
Y H 0.494
H H 0.308
F C 0.328
G S 0.436
G C 0.431
K H 0.937
E H 0.984
G H 0.991
L H 0.996
Y H 0.996
A H 0.996
A H 0.995
V H 0.994
L H 0.987
Q H 0.954
E H 0.889
Q H 0.849
F H 0.837
A H 0.833
C H 0.861
F H 0.870
G H 0.889
Q H 0.871
L H 0.868
D H 0.841
D H 0.757
I H 0.587
R H 0.430
G C 0.393
Q C 0.343
A T 0.460
G S 0.460
D C 0.714
P H 0.906
L H 0.965
A H 0.982
V H 0.989
M H 0.989
T H 0.988
A H 0.989
Y H 0.990
L H 0.991
R H 0.991
W H 0.989
T H 0.987
I H 0.980
Q H 0.942
R H 0.883
H H 0.814
R H 0.595
N H 0.494
N C 0.491
P H 0.470
Q H 0.593
L H 0.820
L H 0.893
R H 0.899
F H 0.889
Y H 0.911
T H 0.912
S H 0.893
E H 0.820
L H 0.699
T H 0.524
N H 0.320
P C 0.391
T C 0.433
P H 0.612
C H 0.704
F H 0.816
A H 0.910
A H 0.926
I H 0.941
V H 0.949
S H 0.925
P H 0.887
A H 0.854
I H 0.869
A H 0.871
S H 0.900
V H 0.943
I H 0.973
R H 0.981
L H 0.987
L H 0.993
A H 0.994
E H 0.994
S H 0.995
I H 0.993
E H 0.982
A H 0.968
G H 0.948
M H 0.928
T H 0.845
R T 0.534
G T 0.634
L C 0.651
F C 0.587
R C 0.658
R T 0.449
D T 0.472
L C 0.549
H C 0.907
A H 0.958
V H 0.981
N H 0.991
S H 0.996
A H 0.995
L H 0.995
A H 0.996
L H 0.993
A H 0.990
G H 0.983
M H 0.976
V H 0.960
N H 0.926
Y H 0.908
F H 0.924
F H 0.899
L H 0.795
S H 0.730
T H 0.792
L H 0.792
A H 0.748
T H 0.723
E H 0.663
G H 0.613
L H 0.555
T H 0.335
S T 0.373
H C 0.408
S C 0.454
P C 0.271
D C 0.466
Q C 0.653
D H 0.908
E H 0.944
E H 0.964
L H 0.987
I H 0.991
R H 0.989
Q H 0.990
Y H 0.990
V H 0.979
A H 0.972
I H 0.988
F H 0.992
T H 0.995
R H 0.995
G H 0.993
I H 0.973
M H 0.903
A H 0.811
D H 0.493
G C 0.408
G C 0.528
A C 0.481
A C 0.475
P C 0.817
A C 0.997
END